Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05682 ATGCTCCTCCCAATCCAGTGTTGCTACCTCAGCACCATCGCTGCGCTAACAATCTTCCTCTCAACCACGTCGTTTTCCGATGCTCAATCCTGTAACGGCATCCTCGTTTCTTATGCCTATACCGGCGGCTCGCGGCTCCCGCCCAATGTCTCCAACGCGGCGGAACAGCCCTACCGGTTCGAATCGACGGTGACAGTACTCAACAACGGTCTCGATGAGCTCAAGTCGTGGAAGGTCTTCGTGGGGTTCGACCATGACGAGTTGTTGGTCTCTGCGTCCAATGCGGTTCTCGCCGATGGCACAACCCTCCCCGCTGCCGTCGGAAACGGCACTGTTTTCGCTGGCTACCCCATGACCGATCTCAAGACCGCCGTCGCAACTGCCGGCGACTTGACCCAGATGCAGGTTCAGATCAACCTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAACCTCGCTAATGATGGATTCCTCTGTCGTGCATCCACCACCCAAGGGAAGAATGCTAGTAGTGTGTGCTGCACCAGAGATCCCAAGTTCAAAACTAACATCACCACGGATGAAGAGTTTCTGCCACGTCAGAATGGTGATCTTAGCATTATGTATGACGTGATAAGAACTTACGATTCTAATTACTGGGCTGAGGTTACTATTGCAAACCATAACCCACTTGGGAGGCTTGACAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCTGTTGTGGATGCTTCTGAATGTCTGTTCGGTAAGCAAGGTACATTCTATAGGGATCTTGACTTTGCCACTGTTTTGAATTGTGAGAGGAGGCCAACCATAATCGATCTCCCTCCAACCAAGTTCAATGATTCTGACCTTGGGAAGATTCCCTTTTGCTGCCGGAATGGTACTATTTTGCCGCCCTCCATGGACCCTAGCATGTCAGCTTCAAGATTCCAAATGCAGGTTTTCAAGATGCCACCGGCGCTTAACCGGTCCCAACTTTCACCGCCGCAGAACTGGAAGATAAGTGGTACCCTCAACCCTGACTATAAATGTGGCCCTCCAGTAAGAGTGAGTCCCACGGAAAACCCTGATCCTTCTGGCTTACCGTCGAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATTACAACAGCCAAGGGAACATCAAGAAAATGCTGTGTTTCGTTTTCGGCCTATTACAATGATTCAGTTGTTCCGTGCAAAACATGTGCTTGTGGATGTCCCCAGAACACAGAGAGAACATGTAGTGCTACTGCCCCAGCTATGTTGCTTCCACCAGAGGCACTTCTTGTTCCTTTTGAAAACCGATCCGCCAAGGCCATTGCTTGGGCAAGCCTGAAACATTTTCCGGTGCCAAAGCCGATGCCATGTAGTGATAACTGTGGTGTGAGCATCAACTGGCATTTGGTCTCGGACTACACTAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGTGAGACCAATTTTGCAGACTGGTTTGCTGCAGTAGAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCTTTCAATGCAACTCTTCTAGATGGCGTAAACAACACAATTATTATGCAAGGTTTGCCAGGACTGAACTACCTTGTAGCAGAAGCTGATGGAGCTGACCCTCTGAGAGATCCTAGGGTGCCTGGTAAACAACAATCAGTGATCTCTTTCACAAAGAAACTTACTCCTGGAATCAATACGATTCGTGGAGATGGCTTTCCCACTAAAGTCTTTTTCAATGGAGAGGAATGCTCTCTTCCATCGGTGCTTCCAACTAGTGGTGGTTCTTGGAATGGTTTTTCATTGGGTACTTCAGTGCTTCTATCACTGTTGTCGTTCCTCTTGATGAGATGA 1935 0.4915 MLLPIQCCYLSTIAALTIFLSTTSFSDAQSCNGILVSYAYTGGSRLPPNVSNAAEQPYRFESTVTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPAAVGNGTVFAGYPMTDLKTAVATAGDLTQMQVQINLVGTVFGVAPPSVPMPKSINLANDGFLCRASTTQGKNASSVCCTRDPKFKTNITTDEEFLPRQNGDLSIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASECLFGKQGTFYRDLDFATVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPALNRSQLSPPQNWKISGTLNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKGTSRKCCVSFSAYYNDSVVPCKTCACGCPQNTERTCSATAPAMLLPPEALLVPFENRSAKAIAWASLKHFPVPKPMPCSDNCGVSINWHLVSDYTKGWSARVTLFNWGETNFADWFAAVEMDKAAAGFEKMYSFNATLLDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKLTPGINTIRGDGFPTKVFFNGEECSLPSVLPTSGGSWNGFSLGTSVLLSLLSFLLMR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05682 644 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0016020
Viun3g05682 644 PANTHER COBRA-LIKE PROTEIN 7 25 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05682 Viun-Chr3 62428729 62431252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05682 31 618 COBRA Gene Family AT4G16120 69.712 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05682 - - gmx:100803929 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05682 3 62428729 62431252 Viun3g05682 3 62428729 62431252 ECH
Viun3g05682 3 62428729 62431252 Viun9g00111 9 701138 703939 PCT