Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05677 ATGAGAGTTCAGAAAGAAGGAGCAAAAGATGAAGGTGGCTTTTTCCACATGTTTGACTGGACCTCAAAATCACGGAAGAAATTATTTTCAACCACGCCGGAGTCCTTGAAACAAAGAAGAAAAGTTGATGGCAACTTGGCAACGATGCTTCCCTATCTGGTGGACGAAGATGGTGAAATTGGAATAGGGGGAAGTATTAGAGATAGTGGTGATCATAGCTGTGCTACATCTGTTATAGATTCTGAAGTATGTGGAACAAGGGCCCCTGGTGTAGTTGCTAGGCTTATGGGATTGGATTCATTGCCATCTTCCAGTTTTTCTGATCCATATTTTGATAGCCAATGCATTCAAGATGTGCAGTACTGGAGGAAAAATCTCAATCATCTTCATGATCATCAGATTCTATATTCTGGAAAGTTGGTTGAAAAAGCTGAGGGAACTTCTAGGAATTTCATGGAGGCAAAGCCTCTACAGACCCGTAGCAAGCCAATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCCCTTACACACCATAAACTTTTGTCCCCAATTAAGAATCCTGGTTTTGTTCCATCAAATAATGCTACATACATCATGGAAGCTGCAGCAAGAATTATTGAACCTGGACGCCAAGCTGCTACAAAGGCTAAAGCACCTCTGGTAGAGGCTTCACAAAAGGAAAAACTAATTAGTTCATTGAGGGTTAGAGACCTTAAAGAAAAAGTGGAGGCTTCACAAAAGGGACAACTAATTAGTTCATCTTCAGAGACCTCTAGAGTTAGAGATCCGAAAGGAAAAAGAGAAACCTCTCTTAGAACTAGTAGGCTTTTTGAAACTTCTCATAGGTTGACTGAGTCTAATGATGCCAAATATCTAAAAGGACAATCTTTGAACAAAAGTTGGAATGGACTTGTGGATGCACCTATCAGATCTTCTACACAAGTAGAAGAAGATTGTTATTCAAAAAATAAAGGGAAGTCTATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTCTAGTAGTGGAAAAAGTTTAGTGGAGCAGAGAGAGCAATGTGACACTAAAAACTCCCAGAAGCCTCTGAAGGCTAATGTTCAAAAAAGTTTGCACATGAAATCCTCTGGTCAAGATGCTTCTGGTGTTCTCAGGCAGAATAATCAGAAACAGAATTGTCCAATGGATAAAGACAAACCACCATCAAAGCAATTGGTTTCCAATTCACAAGGTAGAAAAGTTGTGACTGGGGATTCTTCTGGTGGACGACATAGAAGCTCTAGTAATAAATCTGCTGCAAAATCTAAAGCTGGGCCCAAAAAATCATCAACGAGTGTGACAGACAGTGAAAAGGAGGTCTTGTATACTCGTACAAACAATTTTCCAAGGAAAAAGAGGTCTACAGACAGGGACTGGAATGATAGGGTTGTTGATAATTTATTCATCGACAAATCGCAGAAGCCTGTGCAGTCTAATGTAGTTAGTAATAAATACCAAGGTGAGGCTGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCATGCCCTTGACAAGAAGCAATTCTGGTTTTGAGACACCTGGCCTAAATTCCTTGGATCAGCATATTAGAAGAGTGTTGGTTGATACTGAAACTGATAATGCAGGATACAGTGCAGTTGGTGGTGATGCCTTAGGTATTCTTTTGGATCAGAAGTTGAGGGAGTTAACATATGGAATTGGGAACTCTTGTGATGACTCTCTCAAAGCAAGGTCACCTTCCAGCACTGCACCAAAATCCAAAGATCTGGTTCCCACCCTTAATTCAGTTAACCTCTTTCCAGGGTTGCAACAGAAGAAAGATCAAGACATGATCAGTAACCGCTCCTATCTTCCAGAATTATCATCCCAGCATAGGCTTCGGCTAGATAAGATGGAAGAGTGTGAGATCAATCCTATGGAAGCAGGGTTATTCAATTCAGGACAGCCGAGTCCAATATCCGTTCTTGACCCTTCTTTTTCTACTGAAAGCTGTGAATCTCCATTCAGTGCAAGTGCTTCCAGTTCAGAAGACCAAAAAAGGAGGAAGCAAGTTGTGGGCTCAGGAAGTGGCTATACAGACTTGTTTGATTCAGCATCAGGTTGGACCATGCTAAGGAAACAATCAAGTAGATTTTCCCAAATGAAGATTGGAGAATCAAATTGCACATGGGAGTTAGAGTATGTAAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCTCTTGGCAGAGCTCGTGAGATTGTGAACCCTCATCTGTTCAACCAGTTGGAAAACCGAAGGGGAAGGTTTGAGAGTGATGGTGGTGAGTGCAGAATAAGAAGGAAAGTTATATTTGATTGTGTGAGTGAGTGTTTGAACTTGAGATGCAGACGTTATGTTGGTGGGGGTTACAAAGTGTGGGCAAAAGGGGTTGCAATGGTGAGAAGAAATGAATGGTTGGCAAAGGAAGTGTGGAAGGAAATTTCAAGTTGGAGAGATATGAGGGACTCAATGGTGGATGAACTGGTAGATAGGGACATGAGCATTCAATATGGACAATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCAGTGGTTGAAGACCAAATATTTGATTCTTTGGTTGATGAATTCGTTGCTGAAATCCTGCAACTGTAA 2721 0.4061 MRVQKEGAKDEGGFFHMFDWTSKSRKKLFSTTPESLKQRRKVDGNLATMLPYLVDEDGEIGIGGSIRDSGDHSCATSVIDSEVCGTRAPGVVARLMGLDSLPSSSFSDPYFDSQCIQDVQYWRKNLNHLHDHQILYSGKLVEKAEGTSRNFMEAKPLQTRSKPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKNPGFVPSNNATYIMEAAARIIEPGRQAATKAKAPLVEASQKEKLISSLRVRDLKEKVEASQKGQLISSSSETSRVRDPKGKRETSLRTSRLFETSHRLTESNDAKYLKGQSLNKSWNGLVDAPIRSSTQVEEDCYSKNKGKSISLAIQAKVNVQRREGLSSSSGKSLVEQREQCDTKNSQKPLKANVQKSLHMKSSGQDASGVLRQNNQKQNCPMDKDKPPSKQLVSNSQGRKVVTGDSSGGRHRSSSNKSAAKSKAGPKKSSTSVTDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFIDKSQKPVQSNVVSNKYQGEAEEVKKKDMDVVSFTFTMPLTRSNSGFETPGLNSLDQHIRRVLVDTETDNAGYSAVGGDALGILLDQKLRELTYGIGNSCDDSLKARSPSSTAPKSKDLVPTLNSVNLFPGLQQKKDQDMISNRSYLPELSSQHRLRLDKMEECEINPMEAGLFNSGQPSPISVLDPSFSTESCESPFSASASSSEDQKRRKQVVGSGSGYTDLFDSASGWTMLRKQSSRFSQMKIGESNCTWELEYVNDILCNVELMYMDFSLGRAREIVNPHLFNQLENRRGRFESDGGECRIRRKVIFDCVSECLNLRCRRYVGGGYKVWAKGVAMVRRNEWLAKEVWKEISSWRDMRDSMVDELVDRDMSIQYGQWLDFEVDTFQLGAVVEDQIFDSLVDEFVAEILQL 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05677 906 MobiDBLite consensus disorder prediction 688 710 - -
Viun3g05677 906 MobiDBLite consensus disorder prediction 371 407 - -
Viun3g05677 906 Pfam DUF761-associated sequence motif 77 107 IPR032795 -
Viun3g05677 906 MobiDBLite consensus disorder prediction 345 361 - -
Viun3g05677 906 MobiDBLite consensus disorder prediction 251 279 - -
Viun3g05677 906 Pfam Domain of unknown function (DUF4378) 747 898 IPR025486 -
Viun3g05677 906 MobiDBLite consensus disorder prediction 414 463 - -
Viun3g05677 906 MobiDBLite consensus disorder prediction 345 463 - -
Viun3g05677 906 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05677 Viun-Chr3 62381938 62386870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05677 6 904 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.065 3.16e-92 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05677 - - gmx:102660038 1313.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05677 3 62381938 62386870 Viun9g00106 9 641270 646471 PCT