Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05665 ATGGCAAAGTCGAAGAACCACACCGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGCATCAAAAAGCCAAAGAGGCATCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTTTGAGGAACCAGAGGTACGCGAGGAAGCATAACAAGAAGAGCGGTGAAACAGCCTCTGAAGAAGAGTAA 186 0.4946 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETASEEE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05665 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 59 IPR002673 GO:0003735|GO:0005840|GO:0006412
Viun3g05665 61 MobiDBLite consensus disorder prediction 1 61 - -
Viun3g05665 61 Gene3D - 1 61 - -
Viun3g05665 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Viun3g05665 61 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05665 Viun-Chr3 62287589 62288326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05665 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 86.885 2.41e-34 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05665 K02905 - gmx:100777189 130.183