Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05652 ATGGTTGACACTTTCAGTGAAGAGAGTAGATTTCATATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTCGAGAGGAAGTGTGAGATTGGAACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGCAGATGGGTGTACTAATGGTATATGTGTTTCCTAAGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGCAAACTCCTTCTGAATCATTGCTGAAGATTGGTTGCATACTAGGCCTTAGGGTCTCTCCTTCACACAGGAGAAAGGGGATTGGACTGAAACTTGTCACCTCAGTTGAAGAATGGATGCTGAGAAATGGGGTTGAATATGCATTCCTGGCCACCGAAAAGAACAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATTTGTGAGTCTCAGCTCACTTTTCATATTTGTGCATCCAATTAGTTTCCCTGCAAAGCACCTTTCCAAGGATATAGAAATCGAGAAGGTAAACATAGACCAGGCAATTTCCTTATACAGAAGAACCCTGATGGCGAAAGAGCTTTACCCATTAGACATGGATAGTATTTTGAAGGAGAATCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAGGGAGGGTTACTCAACTTGCAGAGAAAGGAAGACATGATTACCAATGAAATCACAAGCTCGTGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTACAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTTACACAACTTTAAATCATGCAAGAGACAAAATTTTCCCTTGTCTGAGAATGTCGGTGAGTGACTCACTGTGCAGGCCCTTTGGGTTTCTCTTCCTCTATGGGCTCCACGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATCCATATGGAGGTTCACATCAAGGATGGGAGAAAGTTTGAAGGACTGCAGAGTGGTTATAACGGAGCTAGGGTTTGGTGATCCACTTGTAAACCATGTCCCTCAAACAGCTTCTATGTCGTGTATCGATGATATTTGGTACACGAAAAGAATTTCAAGCCACAATGACGAAAAGGATGATGAATTGCTGATTAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1221 0.4259 MVDTFSEESRFHIREFDEDRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLQMGVLMVYVFPKVAELLESKELVGVVRGCIKSMQTPSESLLKIGCILGLRVSPSHRRKGIGLKLVTSVEEWMLRNGVEYAFLATEKNNDASRNLFTNKCKFVSLSSLFIFVHPISFPAKHLSKDIEIEKVNIDQAISLYRRTLMAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKEDMITNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLYTTLNHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWRFTSRMGESLKDCRVVITELGFGDPLVNHVPQTASMSCIDDIWYTKRISSHNDEKDDELLIKRQIGNVFVDPRDF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05652 406 CDD NAT_SF 76 145 - -
Viun3g05652 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 189 IPR000182 GO:0016747
Viun3g05652 406 Gene3D - 71 173 - -
Viun3g05652 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 159 IPR016181 -
Viun3g05652 406 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 406 - -
Viun3g05652 406 Pfam Acetyltransferase (GNAT) family 80 164 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05652 Viun-Chr3 62104914 62106526 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun3g05652 Acetyltransf_1 3.7e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05652 - - gmx:100814448 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05652 3 62104914 62106526 Viun3g05652 3 62104914 62106526 ECH
Viun3g05652 3 62104914 62106526 Viun6g01843 6 25568805 25570912 PCT