Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05635 ATGGTTTTGGTGGAGCATTATGCCTTCAATTTTGGTTCCTTCATGGGATTTCTTGTCTGTGCAGCATCATCGGCTGAGTCACGCGGGCTTGTGACAGCGCAAACAATTGAAAGAGCTTTTCGCCAGACGGAAGACGGATACACAGCCCTCGTGTCAAGTTCCTGGAATGCTCGACCTCAAATTGCGAGTGCTGGTACCTGTTGTCTAGTTGGAGTGATATTTCAACAGACACTCTTTGTGGCAAACGCTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGCAACACTGGAGGTATGGCTGCAATTCAGCTGTCTACAGAACACAATGCAAATCTTGAGGCTGTTAGACAGGAACTTAAAGAATCACACCCTCATGATCCTCAAATTGTGGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCAAGATCTATAGGTGACGTATATTTAAAACATCCACAATTTAACCGGGAACCACTTAATCCAAAATTCAGACTTCCTCAACCGATGCACATGCCTATCCTGAGTGCTAATCCCAGTATTCTTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAGAAAGCTGTGGATATTGTAAACAGCAATCCACATGCGGGTAGTGCGAAGAGACTTATCAAGGCCGCCCTCCACGAAGCAGCAAGAAAACGAGAAATGCGGTATTCGGATCTGCGTAAGATTGACAAGAAGGTTCGACGCCATTTCCATGATGATATATCTGTTATTGTTTTATTCTTAAACCACGACCTTATTTCCAGAGGCACAGTGCTAGACTCGGCACTTTCACTTCGAAGCGCTCTCGATCACTGA 885 0.4441 MVLVEHYAFNFGSFMGFLVCAASSAESRGLVTAQTIERAFRQTEDGYTALVSSSWNARPQIASAGTCCLVGVIFQQTLFVANAGDSRVVLGKKVGNTGGMAAIQLSTEHNANLEAVRQELKESHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYLKHPQFNREPLNPKFRLPQPMHMPILSANPSILSHPLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISRGTVLDSALSLRSALDH 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05635 294 PANTHER PROTEIN PHOSPHATASE 32 269 IPR015655 GO:0004722|GO:0006470
Viun3g05635 294 Pfam Protein phosphatase 2C 32 241 IPR001932 -
Viun3g05635 294 CDD PP2Cc 36 271 IPR001932 -
Viun3g05635 294 ProSiteProfiles PPM-type phosphatase domain profile. 1 271 IPR001932 -
Viun3g05635 294 SUPERFAMILY PP2C-like 31 272 IPR036457 -
Viun3g05635 294 Gene3D - 18 279 IPR036457 -
Viun3g05635 294 SMART PP2C_4 2 269 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05635 Viun-Chr3 62004285 62007248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05635 24 293 PP2C-type Phosphatase Gene Family AT3G12620 60.741 1.12e-115 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05635 K01102 - gmx:100811922 493.426