Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05633 ATGCTCCTGGCATTGATGAATCTGTTCTCGCTGTGTTGGAAGCCGTTCGGGCGCGATGCTGATCGATACGATTCCATCGGAGTTATCGGGAGCAACTTCGCCGGGAGAGAAGGCAGAGAAGGCTTGCTCTGGTTCCGCGACGTCGGAAAATATGCCTCCGGCGATTTCTCCATGGCCGTAGTTCAGGCCAACCAGGTTCTCGAAGACCAAAGCCAGATCGAGTCCGGTCCTCTCGGCACATTCGTCGGCATATACGACGGTCACGGAGGACCCGACGCCTCCAGATATGTCTGCGATCACTTGTTTCGCCATTTTCAAGCATCATCGGCTGAGTCACGCGGGCTTGTGACAGCGCAAACAATTGAAAGAGCTTTTCGCCAGACGGAAGACGGATACACAGCCCTCGTGTCAAGTTCCTGGAATGCTCGACCTCAAATTGCGAGTGCTGGTACCTGTTGTCTAGTTGGAGTGATATTTCAACAGACACTCTTTGTGGCAAACGCTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGCAACACTGGAGGTATGGCTGCAATTCAGCTGTCTACAGAACACAATGCAAATCTTGAGGCTGTTAGACAGGAACTTAAAGAATCACACCCTCATGATCCTCAAATTGTGGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCAAGATCTATAGGTGACGTATATTTAAAACATCCACAATTTAACCGGGAACCACTTAATCCAAAATTCAGACTTCCTCAACCGATGCACATGCCTATCCTGAGTGCTAATCCCAGTATTCTTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAGAAAGCTGTGGATATTGTAAACAGCAATCCACATGCGTGCGAAGAGACTTATCAAGGCCGCCCTCCACGAAGCAGCAAGAAAACGAGAAATGCGGTATTCGGATCTGCGTAA 1002 0.482 MLLALMNLFSLCWKPFGRDADRYDSIGVIGSNFAGREGREGLLWFRDVGKYASGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDASRYVCDHLFRHFQASSAESRGLVTAQTIERAFRQTEDGYTALVSSSWNARPQIASAGTCCLVGVIFQQTLFVANAGDSRVVLGKKVGNTGGMAAIQLSTEHNANLEAVRQELKESHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYLKHPQFNREPLNPKFRLPQPMHMPILSANPSILSHPLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHACEETYQGRPPRSSKKTRNAVFGSA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05633 333 Gene3D - 47 332 IPR036457 -
Viun3g05633 333 SUPERFAMILY PP2C-like 65 306 IPR036457 -
Viun3g05633 333 MobiDBLite consensus disorder prediction 310 333 - -
Viun3g05633 333 SMART PP2C_4 42 331 IPR001932 -
Viun3g05633 333 CDD PP2Cc 56 307 IPR001932 -
Viun3g05633 333 PANTHER PROTEIN PHOSPHATASE 53 310 IPR015655 GO:0004722|GO:0006470
Viun3g05633 333 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Viun3g05633 333 ProSiteProfiles PPM-type phosphatase domain profile. 55 333 IPR001932 -
Viun3g05633 333 Pfam Protein phosphatase 2C 79 307 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05633 Viun-Chr3 62003882 62007908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05633 4 309 PP2C-type Phosphatase Gene Family AT3G17090 67.961 7.47e-155 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05633 K01102 - gmx:100790813 572.778