Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05614 ATGGTTTGGCCAGAGAGGTCCATTTTCAAGATGAACACCATCAATGTTATTCTCATTCTCCCTTTCCTATGTTTGAGTACTTTCTTCATTAAAGCATCTGCAATAAATGCAGCATATGAGTCTGATAGAATAATCGATCTTCCTGGTCAACCTTCAACCCCTTCACTCTCACACTTTTCAGGTTACATCACTGTCAATCAAAACCATGGAAGAGCCCTTTTCTACTGGTTCTTCGAAGCTCAGTCTCAACCCTCCAACAAGCCTCTTCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCTATTGGGTATGGTGCTGTTGTTGAGATTGGACCTCTTTTAGTCACCAAAAACGGGGAAGGACTACATTTCAACGCATATTCCTGGAATCAAGAAGCAAATTTGTTGTTTGTGGAGTCCCCTGTTGGAGTTGGATTTTCTTATACCAACACCTCTTCTGACACCATCTTAGAGGATAACTTAGTAGCTGAAGATGCCTACAATTTCTTGGTGAATTGGCTACAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTACGCTGGTCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAACAGAGATAGCAACAAATACCCCTTTATTAATCTTAAAGGTTTTATTGTAGGTAACCCAGAGACCGATGATTACTATGACTATAAAGGCCTTCTGGAATATGCATGGAGCCACGCGGTCATATCGGACCAGCAATACGAGAAAGCAAAACAAGTATGCGATTATAAACAATTTGAATGGTCTAATGAATGCAACAAGGCCATGACCGAAGTCTTCCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCGGCATGTCTTTCAAACACCACATCCTCAGTAGCTGATGATAGCAACAGTAACGGCCCCGAATCATTTACCGAGGTGAGAAATGATTATAGAGAAAAGAGGATGAGAATTTTTGGGGGATATGACCCTTGTTATTCCAATTATGCAGAAGAATATTTCAACAGAAAAGATGTTCAATCATCGTTTCATGCAGACACTAAAAGAGCCACTAACGTGGCATGGAAGGTTTGCAATAATTCCATACTGAGGGCTTACAACTTCTCTGTGTTCTCGGTCCTACCCATCTACACCAAACTCATAAAGGGTGGGCTTAAGATATGGATATACAGTGGAGACGCAGATGGGAGAGTGCCAGTGATAGGGACAAGATATTGCGTTGAGGCTCTTGGATTGCCTCTCAAGTCTAGGTGGAGAACTTGGTACCATGATAATCAGGTTGGAGGAAGAACAGTGGAATATGAAGGATTAACGTATGTGACAGTGAGAGGAGCTGGTCACTTGGTGCCACTGAACAAGCCCACTGAATCTCTCACTCTTATTCATTCTTTCTTAACAGGGGACCATCTTCCTACTCGTGGATAA 1458 0.4204 MVWPERSIFKMNTINVILILPFLCLSTFFIKASAINAAYESDRIIDLPGQPSTPSLSHFSGYITVNQNHGRALFYWFFEAQSQPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLVTKNGEGLHFNAYSWNQEANLLFVESPVGVGFSYTNTSSDTILEDNLVAEDAYNFLVNWLQRFPQFKSRDFFISGESYAGHYIPQLAELIFDRNRDSNKYPFINLKGFIVGNPETDDYYDYKGLLEYAWSHAVISDQQYEKAKQVCDYKQFEWSNECNKAMTEVFQDYSEIDIYNIYAPACLSNTTSSVADDSNSNGPESFTEVRNDYREKRMRIFGGYDPCYSNYAEEYFNRKDVQSSFHADTKRATNVAWKVCNNSILRAYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSRWRTWYHDNQVGGRTVEYEGLTYVTVRGAGHLVPLNKPTESLTLIHSFLTGDHLPTRG 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05614 485 Gene3D - 336 373 - -
Viun3g05614 485 SUPERFAMILY alpha/beta-Hydrolases 41 482 IPR029058 -
Viun3g05614 485 Gene3D - 384 478 - -
Viun3g05614 485 ProSitePatterns Serine carboxypeptidases, histidine active site. 448 465 IPR033124 GO:0004185
Viun3g05614 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Viun3g05614 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Viun3g05614 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Viun3g05614 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Viun3g05614 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 465 IPR001563 GO:0004185|GO:0006508
Viun3g05614 485 FunFam Carboxypeptidase 384 478 - -
Viun3g05614 485 Pfam Serine carboxypeptidase 48 477 IPR001563 GO:0004185|GO:0006508
Viun3g05614 485 Gene3D alpha/beta hydrolase 36 306 IPR029058 -
Viun3g05614 485 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Viun3g05614 485 FunFam Carboxypeptidase 38 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05614 Viun-Chr3 61864372 61866968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05614 337 481 Calmodulin-binding Proteins AT2G22960 29.452 2.73e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05614 K16297 - gmx:100792930 892.108