Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05541 ATGGGGAATGATGAGGTTGTGTTGGTTGATTTTGATCTGAGCATGTTCTGTGTAAGAGTGAAGATTGCTCTGGCAGAGAAAGGTGTAGAGTTTGAGAGCAGGAAAGAGGATCTGGTGAACACCAAGAGTGAACTGCTTCTGCAAATGAACCCTGTTTACAAAATGGTTCCTGTTCTTATCCACAATGGCAAGCCAATCTCTGAATCTCTCATCATTGTTGAGTATATTGATGAGGTTTGGAGGGATAGGACTCCTCTTTTGCCCACTGATCCCTATCAGAGAGCTCAAGCCAGGTTCTGGGCTGATTTTGTTGATCATAAGGTGCATGAAATTGGAAAGAGGATATGGACTGGGAAGATAGGTGAACATGAGGAAGATAAGAAGGAGTTAGTAGAGAATTTGAAGCAATTGGAAGAGGCTCTTGGGGACATGCCATATTTTGGAGGTCACACATTTGGGTTTGTTGATATTGCTTTGATTCCCTTTTACAAATGGTTCTCTTCTTTTGAGAAAATTGGCAACTTCAAGCTCCACTGTCCAAAAATCACTGCTTGGGCAAACAGATGTTTGGTGAGAGAAAGTGTGTCCAAATATGTTTCTGATGAGAAGGATGTGAATGACTTTGTTCTGAGCTATAGGAAATTAATTGGGATGGACTGA 660 0.4152 MGNDEVVLVDFDLSMFCVRVKIALAEKGVEFESRKEDLVNTKSELLLQMNPVYKMVPVLIHNGKPISESLIIVEYIDEVWRDRTPLLPTDPYQRAQARFWADFVDHKVHEIGKRIWTGKIGEHEEDKKELVENLKQLEEALGDMPYFGGHTFGFVDIALIPFYKWFSSFEKIGNFKLHCPKITAWANRCLVRESVSKYVSDEKDVNDFVLSYRKLIGMD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05541 219 CDD GST_N_Tau 6 80 - -
Viun3g05541 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 201 IPR045073 -
Viun3g05541 219 Gene3D - 90 219 - -
Viun3g05541 219 CDD GST_C_Tau 91 212 IPR045074 GO:0004364|GO:0006749
Viun3g05541 219 FunFam Glutathione S-transferase U20 90 219 - -
Viun3g05541 219 FunFam Tau class glutathione S-transferase 1 89 - -
Viun3g05541 219 Pfam Glutathione S-transferase, N-terminal domain 12 78 IPR004045 -
Viun3g05541 219 SUPERFAMILY GST C-terminal domain-like 78 216 IPR036282 -
Viun3g05541 219 Coils Coil 120 140 - -
Viun3g05541 219 Pfam Glutathione S-transferase, C-terminal domain 123 186 - -
Viun3g05541 219 SFLD Main (cytGST) 2 215 - -
Viun3g05541 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 208 IPR010987 -
Viun3g05541 219 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Viun3g05541 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 84 IPR004045 -
Viun3g05541 219 Gene3D Glutaredoxin 2 89 - -
Viun3g05541 219 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05541 Viun-Chr3 61273405 61274815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05541 4 219 Glutathione S-transferase Gene Family AT1G17180 57.339 3.07e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05541 K00799 - gmx:100781460 373.629