Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05531 ATGAGCCAAAGAAGCAAGAGTTGTGGAGGCATGAAGCTGCTGAAGCAGAGGATGTTTTTGTTTGTGGGGTTGGTGATATTGAAATGGGTTGAAGGCATGGAAGAGACGAATGTGACAGACATAGATATGCTATATGTCAGTGGAAGAGGTTTCTACAGACCTTTGATGGTTGGGCTTACACTTATTAATGGTGCTGCTGCTAAAGGAGCTGTGTGCCTGGATGGATCTTTACCAGGTTACCACTTCCATCGGGGATATGGTTCAGGATCAAACAGTTGGCTTATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATAAAAAATTGTCTTTACAGTAAGAAAACACGTCATGGTTCTTCATTCTTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAATAAAAATCCGTTATTGTGATGGGGCATCATTTAGTGGGGACAGTCAAAATGCGGGAGCTGGATTGTATTTCAGAGGGCAACGCATTTGGCAAGCTGCTATGGAAGATCTAATGTCAAAAGGAATGCGCTATGCCAAACAGGCTCTTTTATCTGGATGTTCTGCAGGAGGTTTAGCTACTATTATACATTGTGATGAATTTCGGGAATTGTTTCCTAGAACCACAAGAGTGAAATGCCTGAGTGATGCTGGATTGTTCCTTGATTCTGTTGATGTCTCTGGCCGTCGCAGCTTAAGGAATTTGTTTGGAAATGTGGTCACTTTACAGGGAGTGCGAAACAGCCTTCCAAGAAGTTGCACCAGTCGCCTCAATCCAATTTTGTGCTATTTTCCTCAGCACTTAATTGCCGGTGTTAGGACACCATTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCAAGTCTTGCTCCACCATCTGCTGACTACCGATGGAACTGGTATGAATGCAGAAAAGATTATGCACGTTGCAGTGGACCACAGATTCAGTATCTTCAAGGTTTTCGAAATCAGATGCTTAGATCTACAAGAGCCTTCTCACGGTCTTACAAAAATGGGTTATTCATAAATTCATGCTTCGCTCATTGTCAATCGGAAAGACAGGATACGTGGTTTGCTCGTGATTCTCCTCGTATAGGAAACAGAGGAATCGCAGAGTCTGTTGGGAACTGGTTTTTTGACCGAGTTAGCGTCCAGGCTATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTTAAGTGA 1263 0.4236 MSQRSKSCGGMKLLKQRMFLFVGLVILKWVEGMEETNVTDIDMLYVSGRGFYRPLMVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIKNCLYSKKTRHGSSFFMEKQIPFIGILSNKAEENPDFFNWNRIKIRYCDGASFSGDSQNAGAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRELFPRTTRVKCLSDAGLFLDSVDVSGRRSLRNLFGNVVTLQGVRNSLPRSCTSRLNPILCYFPQHLIAGVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWYECRKDYARCSGPQIQYLQGFRNQMLRSTRAFSRSYKNGLFINSCFAHCQSERQDTWFARDSPRIGNRGIAESVGNWFFDRVSVQAIGCPYPCDKTCHNLVFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05531 420 Pfam Pectinacetylesterase 55 399 IPR004963 GO:0016787
Viun3g05531 420 PANTHER NOTUM-RELATED 41 416 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05531 Viun-Chr3 61155915 61160267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05531 56 420 Carbohydrate Esterase AT1G57590 68.219 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05531 K19882 - gmx:100791571 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05531 3 61155915 61160267 Viun3g05531 3 61155915 61160267 ECH
Viun3g05531 3 61155915 61160267 Viun1g02937 1 38157161 38160786 ECH
Viun3g05531 3 61155915 61160267 Viun7g01903 7 24190363 24197352 ECH