Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05521 ATGGAGAGGGGTAAGAACGCGTCATGTCCGGCACCGATGAGGGCGGAGTCGAACGGAGGGTTCCAACATGAAAACCCTATGGATTATGCGCTTCCTCTGTTAATACTCCAGATATGTTTGGTCGTTGCTTTTACTAGATTTCTTGCATTCCTCTTCAGACCACTCAGACAACCCAGAGTCATTGCTGAAATCATCGGAGGAATACTACTTGGGCCATCAGCAATTGGACGAAACGAGAAGTTTTTGAATGCGGTTTTTCCAGAGAAAAGCATCACAGTTCTTGAAACACTGGCCAACATAGGTCTTCTGTTCTTTTTGTTTCTCGTGGGGCTTGAGCTTGACATGCGTGCAATTCGACGAACTGGTCGTAAGGCCCTTGGCATTGCCATCTGTGGGATCATTATCCCTTTTCTTCTCGGAATTGCCACTTCCATTGCTCTTCGAGCCACTATATCCAAAGGTGCTGACCTCTTTCCTTTTATACTCTTCATGGGTGTTGCTCTCTCCATCACCGCCTTCCCTGTCCTCGCCAGGATCCTGGCTGAGCTTAAACTCCTCACCACTGACGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCCTCTCTGCTTCAGATGCATCCCCGTTTGTTCCTCTTTGGGTATTGCTCTGTGGTGTTGCTTTTGTCATCTTTGTTGTCTTTGCCATTAGGCCCTTGCTTGTGGCTATGGCTAACCGTTCCCTGGAGGGTGAGCCGGTGAAGGAGGTGTACATATGCATCACATTGACTCTGGTTTTGGTCTGTAGTTTTGTCACTGATACTATTGGAATCCATTCCCTCTTTGGGGCTTTTGCGGTTGGTACTATTATACCCAAAGAAGGTTCCTTCTCTAGGGTGTTGACTGAGAGGATAGAAGACCTGGTTTCTGGCCTTTTCATGCCACTGTATTTTGTCTCCAGTGGCTTGAAGACCGATGTGGCAACAATTAATGGAGGTCTTTCTTGGGCAATGCTAATGCTTGTTATATTCAATGCTTGCTTCGGGAAGATTATTGGTACTACTGTTGTTTCCTTATTGTGTAAGGTGCCTTCCACAGAAGCCCTGGCTCTTGGATTCCTCATGAACACAAAAGGCTTGGTAGAACTCATTGTTCTCAACATTGGGAAGGACCGTAAGGTGTTGAATGACCAAGCATTTGCCATTTGTGTTGTCATGGCATTGTTTTCTACCTTCATCTCCACCCCAATGGTGATGGTTGTATATAAACCAGCTCGTAGAGGAGCACCTTACAAGCGCAAAACAATTCAACGAGATCCCGACACCGAGCTTCGAATGCTAGCTTGCTTCCACAACACCCACAACATTCCCTCGCTAATCAATCTAATAGAGTGTTCCCGTGGAACCGGAAGAAAAGGAAAGCTTTGTATATACACAATGCATTTGATGGAGCTCTCAGAGCGATCTTCGGCAATCACAATGGTTCACATGGCACGCAAGAACGGGATGCCCTTTTGGAACAAAAAGCGGAATGGCAAAGATCAAATGATCATAGCTTTTCAGGATTATGAGAAACTGAGTGGTGTCAGTGTCCGCCCCATGACAGTCATTTCTGGTCTGAATAGCATCCATGAGGATATCTGTACTACTGCTCACAGAAAGCGTGCAGCCATGATCATCCTTCCATTCCACAAACAGCAACGTGTGGATGGAACGATGGAGTCAGTGGGACATTCATTCCAAGAGATGAATCAACTTGTGCTATGCCATGCTCCTTGCTCGGTGGGGATTTTTGTTGATCGAGGTCTTGGAGGGACAAGCCAAGTTCAAGCTAGTGATGTGTCTTATGAGATAGTGGTACCTTTCTTTGGAGGGCATGATGATCGTGAAGCCCTTTGTTATGGAATGAGAATGGGTGAGCACCCTGGAATTTTTGTAAATGTGTATAAGTTTGTAACTCCAGCAGGGACATCATTGGTTGGGGAGTCATCAAACAAAAATACGAAAGCAATGGATGTGATTGACGGCAACGATTATGATGATAAGAAAGAGGATGATGAATTGTGGAACGAGTTTTTAAGTGCATGCAACAGGAGCAGCCAAGAGACAATGAAGTATGAGGAAAAGGTAGTAGAAAGCAAAGGAGATATTGAGATAGCATTGAAGGAAATGAATAGATGCAACCTTATAGTGGTTGGTAGAATGCCATCAGTGGCAGCTTTGGGTAGCATAAGTGATTGTCCAGAGCTTGGACCTGTGGGAAGCTTTGTTGCTTCTTCAGATTTTTCCACCGTTACGTCTGTTATGGTAATTCAGCAGTACAATCCATCAACTGACATTCATCCGTTTGTGAGGGAGGAATCTGATTTACCAGATATTGCAGATGCGCCAAGGGGTTAA 2418 0.4541 MERGKNASCPAPMRAESNGGFQHENPMDYALPLLILQICLVVAFTRFLAFLFRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNAVFPEKSITVLETLANIGLLFFLFLVGLELDMRAIRRTGRKALGIAICGIIIPFLLGIATSIALRATISKGADLFPFILFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSASDASPFVPLWVLLCGVAFVIFVVFAIRPLLVAMANRSLEGEPVKEVYICITLTLVLVCSFVTDTIGIHSLFGAFAVGTIIPKEGSFSRVLTERIEDLVSGLFMPLYFVSSGLKTDVATINGGLSWAMLMLVIFNACFGKIIGTTVVSLLCKVPSTEALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVVMALFSTFISTPMVMVVYKPARRGAPYKRKTIQRDPDTELRMLACFHNTHNIPSLINLIECSRGTGRKGKLCIYTMHLMELSERSSAITMVHMARKNGMPFWNKKRNGKDQMIIAFQDYEKLSGVSVRPMTVISGLNSIHEDICTTAHRKRAAMIILPFHKQQRVDGTMESVGHSFQEMNQLVLCHAPCSVGIFVDRGLGGTSQVQASDVSYEIVVPFFGGHDDREALCYGMRMGEHPGIFVNVYKFVTPAGTSLVGESSNKNTKAMDVIDGNDYDDKKEDDELWNEFLSACNRSSQETMKYEEKVVESKGDIEIALKEMNRCNLIVVGRMPSVAALGSISDCPELGPVGSFVASSDFSTVTSVMVIQQYNPSTDIHPFVREESDLPDIADAPRG 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05521 805 Gene3D - 33 435 IPR038770 -
Viun3g05521 805 FunFam Cation/H(+) antiporter 15 33 435 - -
Viun3g05521 805 PANTHER CATION/H + ANTIPORTER 8 781 - -
Viun3g05521 805 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05521 Viun-Chr3 61097784 61102064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05521 6 801 Antiporter Super Family AT3G17630 66.085 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05521 K26731 - gmx:100780382 1270.37