Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05519 ATGGGTGGGTTAGCTAAGATAAGAAAAGAGCATGTTGTGATCCTGGTGGTGGTAATAGGATTGTGTAGCAGTGTTGTTGAAAGTAGGAAACATGTGAGCATCAAGAACAGGCTTGGAGCTGGAAACAACATCACTCTGCATTGCCAGTCCAAGGACAATGATCTGGGACAACAAAACATAGAAAACGGGAAAGAGTTTGGGTGGGACTTCTCAGACAATGTTTTTGGAACAACACTGTTTTTCTGTGATGTGGGGTGGGAAAAGGTTAAGGACTATCATTTTAATGCTTATTCCTTCGGCAGGGACAGAGTACGATGTGATGGTGTCGGATGTTCATGGCTCCTATCTGCTGAAGGCATTTATGGCTTCAATGGACAAACGGGTTTCTGGGAATTCATGTACCCATGGCCAAATTAA 417 0.4365 MGGLAKIRKEHVVILVVVIGLCSSVVESRKHVSIKNRLGAGNNITLHCQSKDNDLGQQNIENGKEFGWDFSDNVFGTTLFFCDVGWEKVKDYHFNAYSFGRDRVRCDGVGCSWLLSAEGIYGFNGQTGFWEFMYPWPN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05519 138 Pfam Plant self-incompatibility protein S1 31 136 IPR010264 -
Viun3g05519 138 PANTHER - 26 124 IPR010264 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05519 28 136 Carbohydrate Esterase AT3G16970 32.432 3.61e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05519 - - gmx:102670225 230.335