Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05518 ATGGGAACGGGTAATAACTTGTCATGCCCTGAACCCATGAAAGTCACGTCCAACGGAGGGTTCCAACATGAAAATCCTCTGGATTATGCGCTTCCTCTGTTAATCCTCCAAATATGTTTGGTCGTTGCTTTTACTAGATTTCTTGCATTCCTCTTCAGACCCCTCAGACAACCCAGAGTCATAGCTGAGATCATTGGAGGAATACTACTGGGGCCATCTGCATTTGGGCGAAACGAGAAGTTTTTGAATGCGGTTTTTCCAGAGAAAAGCATCACAGTTCTTGAAACGCTGGCCAATATAGGTCTTCTGTTCTTTTTGTTTCTCGTGGGACTTGAGCTTGACATGCGTGCAATTCAACGTACTGGTCACAAGGCCTTAGGCATTGCACTCTGTGGGATCACTGTGCCTTTTGTTCTTGGCATTGGCACTTCCATTGCTCTTCGAGCCACTGTATCCAATGATGCTGAGTTGTTTCCTCTTCTAGTCTTCATGGGTGTTGCTCTCTCCATCACCGCCTTCCCTGTCCTCGCGAGGATCCTGGCTGAGCTTAAACTCCTCACCACTGACGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCCTTTCTGGTTCCGACGCATCCCCCTTTGTTCCTCTTTGGGTATTGCTCTGTGGTGCCGCTTTTGTCATCTTTGTTGTCTTTGCCATTAGGCCGTTGCTTGTGGCTATGGCTAACCGTTCCCCGGAGGGTGAGCCGGTGAAGGAGGTGTACATATGCATCACATTGACTCTGGTTTTGGCTTGCAGTTTTGTCACTGATACTATTGGAATTCATTCCCTCTTTGGGGCTTTTATGGTTGGTACTGTTATGCCCAAAGAAGGTTCCTTTTCTGGGGTGTTGACCGAGAGGATAGAAGACTTGGTTTCTGGCCTTTTCATGCCACTATATTTTGTGTCCAGTGGGTTGAAGACTAATGTAGCAACAATTAAGGGAGCTCTTTCTTGGGGAATGCTAATGCTTGTTATATTCAACGCTTGCTTTGGGAAGATTATTGGCACTACTGTTGTTTCATTACTGTATAAAGTGCCTTCCAGAGAAGCCCTGGCTCTTGGATTTCTCATGAACACAAAGGGTTTGGTAGAACTCATTGTTCTCAACATTGGGAAGGACCGTAAGGTGTTGAATGACCAAGCATTTGCCATTTGTGTTGTCATGGCATTGTTTACCACCTTCATCTCCACCCCAATAGTGATGGCTGTATATAAACCAGCTCGCAGAGGAGCACCTTACAAGCACAAAACAATTCAACGAGATCCTGACACTGAGCTTCGAATGCTAGCTTGCTTCCACAGCACCCGTAACATTCCCTCGCTAATCAATCTAATAGAGTGTTCCCGTGGGACCGGAAGGAAAGGAAAGCTTTGTATATATGCAATGCATTTGATGGAGCTCTCGGAGCGATCTTCTGCAATCATAATGGTTCACAAGGCAAACAAAAACGGCAGGCCCTTTTGCAGCAAGAAGCGGGATGGCAAAGATCAAATGATCATAGCTTTTCAGGATTACGAGAAACTGAGCAGTGTGAGTGTGCGCCCCATGACAGCTATTTCTGCTCTCAATAACATCCATGAGGATATTTGTACTACTGCTCACAGAAAACGTGCAGCCATGATCATCCTTCCATTCCACAAACACCAACGTGTGGATGGATCGATGGAGTCAGTGGGACATTCATTCCAAGACATGAATCAACTTGTGCTATGCCATGCTCCATGCTCGGTGGGAATTTTTGTTGACCGAGGTCTTGGAGGGACAAGCCAAGTCCAAGCCAATGATGTGTCTTATAAGATAGTTGTAGCCTACTTTGGAGGGCGCGATGATCGTGAAGCACTTTGTTATGGAATGAGAATGGCCGAGCACCCTGGGATTTTTCTCAATGTGCTTAAGTTTGTAATAACTCCACCGGCGACATCATTGGCCTCTGGTGCTAAATCGGTTGAGGTGTCATCAAACAAAGAAAGGAAAACAATGGATGGGATTGGTGTGAATTATGATGATGACAAAGATGATGAATTGTGGAGTGAGTTTTTAAGTGCATGCAACAACAACACCCAAGAGTCAATGAAGTATGAGGAAAAGGTAGTGGAAAGCAAAGGGGATATTGAGACAGCATTGAAGGAAATGAATAGATGCAACCTTATATTGGTTGGTAGAATGCCACGAGTGGCAGCTTTGGGTAGCAAAAGTGACTGTCCAGAGCTTGGACCTGTTGGAAGCTTTGTTGCTTCTTCAGATTTTTCCACTGTTACGTCTGTCATGGTAATTCAGCAGTACAATCCCTCAACTGACATTCATCCCTTGGTGATGGAGGAATCTGATTTTCCTGATATGTCAGATTCACCAAGGAGTTAA 2433 0.4538 MGTGNNLSCPEPMKVTSNGGFQHENPLDYALPLLILQICLVVAFTRFLAFLFRPLRQPRVIAEIIGGILLGPSAFGRNEKFLNAVFPEKSITVLETLANIGLLFFLFLVGLELDMRAIQRTGHKALGIALCGITVPFVLGIGTSIALRATVSNDAELFPLLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSDASPFVPLWVLLCGAAFVIFVVFAIRPLLVAMANRSPEGEPVKEVYICITLTLVLACSFVTDTIGIHSLFGAFMVGTVMPKEGSFSGVLTERIEDLVSGLFMPLYFVSSGLKTNVATIKGALSWGMLMLVIFNACFGKIIGTTVVSLLYKVPSREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVVMALFTTFISTPIVMAVYKPARRGAPYKHKTIQRDPDTELRMLACFHSTRNIPSLINLIECSRGTGRKGKLCIYAMHLMELSERSSAIIMVHKANKNGRPFCSKKRDGKDQMIIAFQDYEKLSSVSVRPMTAISALNNIHEDICTTAHRKRAAMIILPFHKHQRVDGSMESVGHSFQDMNQLVLCHAPCSVGIFVDRGLGGTSQVQANDVSYKIVVAYFGGRDDREALCYGMRMAEHPGIFLNVLKFVITPPATSLASGAKSVEVSSNKERKTMDGIGVNYDDDKDDELWSEFLSACNNNTQESMKYEEKVVESKGDIETALKEMNRCNLILVGRMPRVAALGSKSDCPELGPVGSFVASSDFSTVTSVMVIQQYNPSTDIHPLVMEESDFPDMSDSPRS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05518 810 FunFam Cation/H(+) antiporter 15 33 435 - -
Viun3g05518 810 PANTHER CATION/H + ANTIPORTER 8 786 - -
Viun3g05518 810 Pfam Sodium/hydrogen exchanger family 39 424 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun3g05518 810 Gene3D - 33 435 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05518 Viun-Chr3 61070639 61074092 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05518 8 806 Antiporter Super Family AT3G17630 66.253 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05518 K26731 - gmx:100780382 1320.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05518 3 61070639 61074092 Viun3g05518 3 61070639 61074092 ECH