Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05513 ATGGGGTTCCACATCGAAGACCCTCTCTCCGGCTTCACAATAGGCCAGGCCATATACGAGGCTGCTCTCATCATTGCAGTTCTCAGATGGGTCTTCTGCTTCCTCTTCAGACTCATCAACGACACAACCACAACCTCCGAAGACAACCACCCACCTGAAACCTGTCCTCAGACCACAAGGGAAAGAGACACCACCCTTTTGCTCACCACCTTCGGAGAGATTAAGGACAGGCTCCCACAGACAGAGGACACGTGTGCGGTTTGTCTCAGCCAGCTGGAGGTGGAGGACGAGGTTCGGGAACTCATGAACTGTTACCACGTGTTCCACAGAGAGTGCATAGACCGATGGTTGGAGCACGAACACGATAATCACAACCCCACGTGTCCGCTCTGCAGAGCCCCTTTGCTGAATTCTTGCTGCCACCACTACTCCGCCGCTTGTCAGCCTCCTCCTCAGCCTAGTTGGGCCGTGGAGAGACTTCTCTATCTCTTCGGCGACGATTTGCTACCTTGCTAG 516 0.5446 MGFHIEDPLSGFTIGQAIYEAALIIAVLRWVFCFLFRLINDTTTTSEDNHPPETCPQTTRERDTTLLLTTFGEIKDRLPQTEDTCAVCLSQLEVEDEVRELMNCYHVFHRECIDRWLEHEHDNHNPTCPLCRAPLLNSCCHHYSAACQPPPQPSWAVERLLYLFGDDLLPC 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05513 171 SMART ring_2 85 131 IPR001841 -
Viun3g05513 171 PANTHER RING ZINC FINGER PROTEIN-RELATED 25 169 - -
Viun3g05513 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 79 136 IPR013083 -
Viun3g05513 171 ProSiteProfiles Zinc finger RING-type profile. 85 132 IPR001841 -
Viun3g05513 171 Pfam Ring finger domain 83 132 IPR001841 -
Viun3g05513 171 SUPERFAMILY RING/U-box 79 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05513 Viun-Chr3 61031012 61031834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05513 1 170 C3H Transcription Factor Family AT3G43430 46.893 3.70e-42 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05513 3 61031012 61031834 Viun3g05513 3 61031012 61031834 ECH