Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05495 ATGGCATCGTCAGAGAATGAACCTTGTCACTCTCCTTCTGCCTCTGATCAAACTCGTCCTCCTCCTCCTTCTAATGTCTGTATACAGAAATTTAGACTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGACCAGGACATATTGGAGAGTACTAAAGATTGATCGTCTAGATCCTTCCGAACTAAATTTACGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTTTTGAGACGGATACATGAGGGTAACAAGTCAACAGGTGGACTTAAATTTGTTACAACTTGTTATGGAATTGTAGGGTTCATCAAATTTTTGGGACCGTACTACATGGTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCGAAGAGTGAGATGATTCCATTGCCATATTCTTCAGTTCGGTCTAACATCAATGATAAAAATGAAAACAGGTACAAGAGGCTCTTATGCATGGTTGACCTTACAAAGGACTTCTTTTTCAGCTACTCATATCACATCATGCGTAGTCTTCAGAGGAACATGTGTGATAATGAGACAGGCCATGTTCTTTATGAGACAATGTTTGTTTGGAATGAGTTCTTAACAAGGGGAATTAGAAATCACCTCCAAAATACTATTTGGACAGTTGCACTAGTTTATGGCTTTTTTAAACAGGATACATTCATGATATCTGGACGGGAGTTTATACTTACACTCATTGCAAGACGATCACGACATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTTAATGAGAAAGGCAGAGTAGCAAATGATGTTGAGACAGAACAAATGGTCTTTGAGGATGTTCCAGAAGGTTTTCCCATCCAAATAAGCTCTGTCATCCAGAACCGTGGTTCAATCCCCCTTTTCTGGTCACAGGAAACATCAAAACTAAATATTAAACCAGATATTATATTGTCAAAGAGGGATCAGAATTATCAAGCCACTAGACTTCACTTTGAAAACCTAGTCAAAAGATATGGGAATCCCATTATTATTTTGAATTTGATTAAGACCCATGAGAAGAAGCCTCGTGAGTCCATACTTCGGGCAGAGTTTGCTAATGCTATAGATATTATTAATAAGGATTTATCTGGGGAGAGCAGGCTTAGGTTTCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTCTTGCAGCTTCTAGCCAAAGTGGCTGCATATGCATTGGCTTTAACAGGTTTTTTCTATTGCCAAGCAACACCGACATTAAGACTAGAAGAATCTCTAAATTGGCCAACTACAGATAATGTTAAGGCAACCTATTCACCTACTGGACCTGTCAATGATGACAACGAGGATGCTAACAATTTGGAAAGGAAACCAAGCGAAGGAAACAACAATGTCATCGAAACTCATTCTACCAAGCCTCCTAAGTTGCAGACGGGGGTGCTGAGGACCAACTGCATTGACTGTTTGGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGACGCCAGCTCCATGCTGTGGGAGTTATTGACCACCCAAAGATTGATCTCGATGATCCTGTAGCTGAGGATTTAATGGGTTTTTATGAGCGGATGGGTGATACTCTTGCTCATCAGTATGGTGGTTCAGCAGCGCACAATAAGATTTTCTCTGAGAGGAGGGGTCAGTGGAGAGCTGCAACACAGTCTCAAGAATTTTTTAGGACTCTTCAACGCTATTACAGCAATGCATACATGGATGCTATGAAACAGGATGCAATCAATGTATTTCTGGGGCATTTTCAGCCACAACAGGGTAAGCCTGCTCTATGGGAGTTGGATTCAGATCAGCTCTATGATACAGCAAGACCTGGAGAGGATGATTCAAGGTCATTTTTTAAAAGATCCTTCTCAGATGGGAACATTCTTAATGAAAGTTCTACACCAATGTCAGCCCCAAATGCCAGCCACGTAAAATTCCAAAGCCAATTCTTGTCAGACCGATTAGAAGATGGAGGCAAGGGTCTTACTGAATCAGCACCCGAAATATCTACTGCTGAGAATGACATCACGTTTTCAAGGTACACTCCCACAATTCCTCGGAGAAATCTCTTTGGAGATATGCAAAGAGAGCGTTGCGTTGAAAGTGGTCATATTTGCAATCCTGATCACGGAGATTCCTTCAGCTGCTCCAACTTTGTTGATCTGGATTGGCTGTCGTCTTCAGCAAATTCATGTGAAGAAGAGCCATTTGAGAGATCATCAATCATTAACTCTCCAATTGCTGGAGTTTCTTCCGAAAATGTTGTCAATGGAATAATGGTAGGAGAAGCAACTGCCTCCACAAGTGATTGGGGGGCCTCCAGCCTAAAGGGAGGAGAGCGAACTGAATCTGAGTTATCGTATGGTAATTCACAATCCAACACAGGAGAGGAATTTCCAGATACTTTTGCACAATGGGTGTCTTATGGACAAACACTTTGCCATTGA 2517 0.4136 MASSENEPCHSPSASDQTRPPPPSNVCIQKFRLYETRSNFYMIGRDKTRTYWRVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMVLITKRRQIGAICGHTVYAVSKSEMIPLPYSSVRSNINDKNENRYKRLLCMVDLTKDFFFSYSYHIMRSLQRNMCDNETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQDTFMISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQMVFEDVPEGFPIQISSVIQNRGSIPLFWSQETSKLNIKPDIILSKRDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRAEFANAIDIINKDLSGESRLRFLHWDLHKHFQSKATNVLQLLAKVAAYALALTGFFYCQATPTLRLEESLNWPTTDNVKATYSPTGPVNDDNEDANNLERKPSEGNNNVIETHSTKPPKLQTGVLRTNCIDCLDRTNVAQYAYGLAALGRQLHAVGVIDHPKIDLDDPVAEDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQDAINVFLGHFQPQQGKPALWELDSDQLYDTARPGEDDSRSFFKRSFSDGNILNESSTPMSAPNASHVKFQSQFLSDRLEDGGKGLTESAPEISTAENDITFSRYTPTIPRRNLFGDMQRERCVESGHICNPDHGDSFSCSNFVDLDWLSSSANSCEEEPFERSSIINSPIAGVSSENVVNGIMVGEATASTSDWGASSLKGGERTESELSYGNSQSNTGEEFPDTFAQWVSYGQTLCH 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05495 838 ProSiteProfiles Sac phosphatase domain profile. 166 558 IPR002013 GO:0016791
Viun3g05495 838 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 8 825 IPR043573 GO:0043813|GO:0046856
Viun3g05495 838 MobiDBLite consensus disorder prediction 469 484 - -
Viun3g05495 838 Pfam SacI homology domain 103 399 IPR002013 GO:0016791
Viun3g05495 838 MobiDBLite consensus disorder prediction 793 820 - -
Viun3g05495 838 MobiDBLite consensus disorder prediction 448 484 - -
Viun3g05495 838 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05495 Viun-Chr3 60874818 60883953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05495 27 838 Acyl Lipid Metabolism Gene Families AT5G20840 62.561 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05495 K22913 - gmx:100810079 1504.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05495 3 60874818 60883953 Viun9g03216 9 39292529 39317293 ECH
Viun3g05495 3 60874818 60883953 Viun3g05495 3 60874818 60883953 ECH
Viun3g05495 3 60874818 60883953 Viun9g00530 9 3888039 3902239 PCT