Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05494 ATGAGAGAGATGGGAAGAGAAAGAGAGGCAACAAAGGTAGCATACACAGTGGAGCAGCTTGTGGCCTTCAATCGATACAATCCCGATATTCTTCCAGATCTCGAAAACTATGTCAACGACCAGGTTTCATCGCAAACATACAGCTTGGACGCCAATCTCTGCCTTCTTCGCCTTTACCAGTTTGAACCAGAGAAAATGAGTTCTCAGATTGTGGCCCGCATATTGGTTAAGGCGCTTATGGCAATGCCGGCCCCAGATTTCAGCCTCTGTCTCTTTTTAATTCCAGAACGTGTGCAAATGGAGGAGCAGTTCAAGACTTTGATTGTTCTGTCTCATTATTTGGAGACAGGAAGATTTCGACAATTTTGGGATGAAGCTGCAAAAAGTCGTCATATAGTTGAAGCTGTGCCAGGGTTTGAGCAGGCAATCCAGGGATACGCAGTCCATGTCCTTTCCCTGACTTACCAAAAGATTCCTAGAACTGTTCTTGCTGAGGCTATTAACATCGAAGGTTTATCCTTGGACAAATTTCTTGAGCACCAAGTAGCCAACAGTGGTTGGGTTATTGAGAAAAGCCAAGGCAGGGGTCAACTCATTGTCCTTCCGAGAAATGAATTTAATGACCCAGCTTTGAAGAAAAATGCTGCAGACAGTGTACCATTGGAGCACATTACCCGCATCTTCCCCATTCTTAGTTGA 699 0.4478 MREMGREREATKVAYTVEQLVAFNRYNPDILPDLENYVNDQVSSQTYSLDANLCLLRLYQFEPEKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAVHVLSLTYQKIPRTVLAEAINIEGLSLDKFLEHQVANSGWVIEKSQGRGQLIVLPRNEFNDPALKKNAADSVPLEHITRIFPILS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05494 232 SUPERFAMILY "Winged helix" DNA-binding domain 137 229 IPR036390 -
Viun3g05494 232 Pfam CSN8/PSMD8/EIF3K family 67 193 IPR033464 -
Viun3g05494 232 FunFam Eukaryotic translation initiation factor 3 subunit K 128 231 - -
Viun3g05494 232 ProSiteProfiles PCI domain profile. 47 206 IPR000717 -
Viun3g05494 232 Gene3D - 128 231 IPR036388 -
Viun3g05494 232 SUPERFAMILY ARM repeat 14 134 IPR016024 -
Viun3g05494 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 9 229 IPR009374 GO:0003743|GO:0005737|GO:0005852
Viun3g05494 232 FunFam Eukaryotic translation initiation factor 3 subunit K 9 125 - -
Viun3g05494 232 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Viun3g05494 232 Gene3D ARM repeat; domain 1 10 125 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05494 4 232 Eukaryotic Initiation Factors Gene Family AT4G33250 74.892 1.36e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05494 K15028 - gmx:100306445 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05494 3 60870326 60873561 Viun3g05494 3 60870326 60873561 ECH