Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05488 ATGGCGAAAGGTGGAAAACTAATGAGGCTGAAATCAGTGCTGAAGAAATGGAACTCATTCGGCAACGGCAGGCAGAGCCGCCACAGCACCAGCGCCGTCGCCGACGACGAGTCCTCCACCAGATCGGATCTCCACGCCGTCTACGTCGGCAAGTCCCGCCGCCTCTACCGTGTCTCCTCCGGCGTCCTCGACAACCCCGTCTTCCGGGAACTCGTGGAGAGGTCCCGCGACGACTCCGACCACCAAGACGACACCATCAATGTCGCATGCGAGGTTGTCCTCTTCGAACACCTGCTCTGGATGCTCGACAACGCCGACCCACAACCCGAGTCTCTCAACGAACTCGTCGACTTCTACGCCTGCTAA 366 0.5984 MAKGGKLMRLKSVLKKWNSFGNGRQSRHSTSAVADDESSTRSDLHAVYVGKSRRLYRVSSGVLDNPVFRELVERSRDDSDHQDDTINVACEVVLFEHLLWMLDNADPQPESLNELVDFYAC 121
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05488 121 PANTHER EXPRESSED PROTEIN 25 120 - -
Viun3g05488 121 MobiDBLite consensus disorder prediction 19 41 - -
Viun3g05488 121 Pfam Auxin responsive protein 10 102 IPR003676 GO:0009733
Viun3g05488 121 MobiDBLite consensus disorder prediction 19 37 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun3g05488 Viun-Chr3 60794193 60794816 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05488 3 106 Calmodulin-binding Proteins AT4G34750 25.714 4.72e-07 44.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05488 - - ccaj:109809545 206.453