Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05487 ATGATGGGTCACGTTGAAAATGGCTTTTCATTTTTTGCTGCAGTTACACTCGCACTCCACCTCGTAACAGCAACCACTCTTTACCCTCCCCACTCTTCTTTAAACGGCGCCGTTAGAATCGTCAGGGTTCGCCGGGACGGCGCAGGGGACTTCAGGACGGTAACGGAGGCCGTGAACAGCATTCCTTCGGGGAACAAGCGGCGAGTGGTGGTGTGGATTGGCATCGGCGAGTACCGGGAGAAGGTCACCGTGGATAGGACCAAACCTTTCGTCACGTTTTATGGAGAGAGAAATGAGAGCGACAGCCACACCATGCCCATCATAACGTACCACGCCACCGCATTAAGGTATGGGACAGTCGACAGCGCCACCGTCGCTGTCGAATCCGACTACTTCGTCGCTGTCAATGTCGCTTTTGTGAACTCGTCTCCAAGGCCAGATGAAAAGAGTGTTGGAGCACAGGCCGTAGCTATGAGGATATCAGGGGACAAGGCTGCATTCTACAACTGCAAGTTCGTGAGTTTTCAGGACACTTTATGTGATGATAAAGGAAGACATTTTTTCAAGGACTGCTACATCAAAGGCTCCTACGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAAGTACCATAGAATCGGTTGCAAAGGGTTTGAGTGTTATCACAGCACAAGCTAGGGAAAGCATTGCAGAAGATACTGGATTCAGTTTCCTTCACTGCAACATTACGGGGAGTGGTAACAGGAACACTTACCTCGGACGTGCCTGGAAGAAGAGCCCTAGAGTAGTATTTGCTCACACTTACATGGGCTCCCTCATCAGTGCCCGGGGATGGTTCACCGATCAACTTCCTCAACGCAATTCTAACCAGACAATCTACTATGGAGAATATAGGTGCATGGGAACAGGAGCTGTTTCCTCAGGGCGTGTAAAATTTCGGAAGACACTGTCTTATGAAGAAGCAAAGCCGTTCATGAGCATGGCCTATATTCATGGAGGAAAGTGGGTTGTCCCACCTCCAAAGTTGTGA 1035 0.4928 MMGHVENGFSFFAAVTLALHLVTATTLYPPHSSLNGAVRIVRVRRDGAGDFRTVTEAVNSIPSGNKRRVVVWIGIGEYREKVTVDRTKPFVTFYGERNESDSHTMPIITYHATALRYGTVDSATVAVESDYFVAVNVAFVNSSPRPDEKSVGAQAVAMRISGDKAAFYNCKFVSFQDTLCDDKGRHFFKDCYIKGSYDFIFGNGKSIYLRSTIESVAKGLSVITAQARESIAEDTGFSFLHCNITGSGNRNTYLGRAWKKSPRVVFAHTYMGSLISARGWFTDQLPQRNSNQTIYYGEYRCMGTGAVSSGRVKFRKTLSYEEAKPFMSMAYIHGGKWVVPPPKL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05487 344 Pfam Pectinesterase 42 334 IPR000070 GO:0030599|GO:0042545
Viun3g05487 344 Gene3D - 40 341 IPR012334 -
Viun3g05487 344 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 338 - -
Viun3g05487 344 FunFam Pectinesterase 36 340 - -
Viun3g05487 344 SUPERFAMILY Pectin lyase-like 40 338 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05487 Viun-Chr3 60775572 60777131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05487 27 344 Carbohydrate Esterase AT5G07410 49.686 1.33e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05487 K01051 - gmx:100790786 565.459