Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05484 ATGGATGATGGTGGAGGTTCCAAACTGAGTGGGATTAGGCAGATTGTGAGATTGAAGGAAATGTTTCAGAAGTGGCAAACTGTGACTCTGGGCTCAAAAGATTCCAACCATGACTCTGATGTGGCTCCTCCTGGGGGCATTCCACCCTTGATTAACAAAAGGCTAACCAATCTTTTGTACTGTGACTCCGACGAGGATAGCTGCTACAGTCCTCAACCGCCGCATGATGTTCCCAAAGGTTACTTAGCTGTCTATGTTGGACCCGAGCTTCGCAGGTTTATCATCCCCACAAGCTACCTTAGCCACTCTTTGTTCAAGGTTTTGTTGGAAAAAGCTGCAGAGGAATTTGGGTTTGATCAGAGTGGTGGACTCACCATTCCATGTGAAATTGAAACCTTCAAATACCTCTTGAACTGCATGGAGAATCACGACGACACATCCGACTCTTGGTGGAATTGCAGCTGGAAACACAGGAACTGTGGAAGAATAAAAACTTGCTCTGATCTATATAGAAGGAAAATCACGGTGCTGGTTTCTGGGCTTTCTTACATGAAGAATGATATAACTCCCCAACAAGAAAGATTTGTGATGGGTAATTTGTTTGTAGAACAGGTGTTAAAAATCTATGTACTTTTCATCCAATGTTTCCCCAATACATGTACTTTGCCAACATATTCAAACAGAACATTTTTGACATTCAATTGA 705 0.4255 MDDGGGSKLSGIRQIVRLKEMFQKWQTVTLGSKDSNHDSDVAPPGGIPPLINKRLTNLLYCDSDEDSCYSPQPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENHDDTSDSWWNCSWKHRNCGRIKTCSDLYRRKITVLVSGLSYMKNDITPQQERFVMGNLFVEQVLKIYVLFIQCFPNTCTLPTYSNRTFLTFN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05484 234 Pfam Auxin responsive protein 68 139 IPR003676 GO:0009733
Viun3g05484 234 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 63 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05484 Viun-Chr3 60771769 60773273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05484 1 147 Calmodulin-binding Proteins AT3G43120 68.874 5.58e-70 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05484 K14488 - vra:106767875 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05484 3 60771769 60773273 Viun3g05484 3 60771769 60773273 ECH
Viun3g05484 3 60771769 60773273 Viun9g00525 9 3844447 3846209 PCT