Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05473 ATGCAAACGCAACCAATTTCCACTCTTGCCTTCACGCTCTTCCTCCTCTTGTTGTCTCCACCACGCGCCGCCGTCGCAAGGCCACCACCAGATCCACTTCGTACATCATGTGCGCAGGCCAGGTACCCCGCTCTCTGCGTCCAAACCCTCTCCAACCTTTCCAACCCCGCCGCCAAGCCCCTCGACCTGGCCCAGGCGGCCGTCAGAGCTAGCCTGGCCCGTACGCGCGGTCTCTCCGTCTACCTTGGGACGCTAAAAGCCGCATCGCAGGGTTTCGAACTGAGGCAGCGGGTTGCGGTGAGTGACTGCGTGCAGCAGATATCCGATTCGGTGATTGAGTTGAGCAAGACGCTGAACGAGTTGCAGCACCTCCGCGACGAAACCTTCCAGTGGCAGATGAGCAACGTCCAGACCTGGACCAGCGCCGCCCTCACCAACGGCGACACTTGCATCTCCGGCTTTAACGCTGTCGCCGCCGCCGCCGGGAATATCAAGTTGGAGCTCAAGCAAAGAGTCACCGACGTCTCCATGTTCACCAGCAACGCGCTTTACCTCATCAGCCGCCTCGCTGATAGCGTCAAGGGGAAGCCTCGCGCCAATTCCGGGAACTGA 612 0.6062 MQTQPISTLAFTLFLLLLSPPRAAVARPPPDPLRTSCAQARYPALCVQTLSNLSNPAAKPLDLAQAAVRASLARTRGLSVYLGTLKAASQGFELRQRVAVSDCVQQISDSVIELSKTLNELQHLRDETFQWQMSNVQTWTSAALTNGDTCISGFNAVAAAAGNIKLELKQRVTDVSMFTSNALYLISRLADSVKGKPRANSGN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05473 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 185 - -
Viun3g05473 203 CDD PMEI-like_3 35 190 - -
Viun3g05473 203 NCBIfam pectinesterase inhibitor domain 8 189 IPR006501 GO:0004857
Viun3g05473 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 189 IPR035513 -
Viun3g05473 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 191 IPR035513 -
Viun3g05473 203 Pfam Plant invertase/pectin methylesterase inhibitor 33 184 IPR006501 GO:0004857
Viun3g05473 203 FunFam Pectinesterase inhibitor 3 29 190 - -
Viun3g05473 203 SMART PMEI_2 28 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05473 Viun-Chr3 60717117 60718098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05473 25 201 Carbohydrate Esterase AT5G53370 27.933 8.37e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05473 - - gmx:100810705 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05473 3 60717117 60718098 Viun3g05473 3 60717117 60718098 ECH