Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05458 ATGGCGAATCATGGAGATTTTACGTATGATGTTTTTATGAGTTTCAAGGGCGAAAACGGGACTCGCTACGCGTTCACCGATCATCTCTACCGAGCTTTGCTCCGTCACGGAATCAACGCCTTCAGAGACGATCAGAGTCTCCGGAGCGGGGACGAAATCCGTCCTTCTCTGCTTCAGGCAATCGAAGCTTCCAGAATCTCTTTGGTCGTGCTCTGTCAAAACTACGCATCTTCCTCTTGGTGCCTTGACGAACTGGCCAAGATCATTCACTGCTACGAAAACAAAGGAAAGCATGTCGTTGCAATTTTTTATTTGGTGGAACCTTCGGATGTACGGTACCAGAAAAACAGTTACGCAACTGCCATGAGTAAACATGAAAGCAGATATGGAAAAGACTCGGAGAAGGTTAAAACATGGCGATCGGCTTTGGCCAGAGTTTGCGACCTAACCGGAATACACTACAGGAACCATATGTATGAAACTGAGGTTATTGAGAAGATTGTGAAAGATACCTCAGCTAAACTGCCTCCCATGCCTTTACAAATCAAGCACCTAGTTGGACTTGATTCTCGTTTTGAACGGGTGAAATCTCTAATAGATGTTGAATCAAATGATGAAGTTTGTATACTGGGGATCTATGGGGTTGGCGGAATTGGCAAAACCACATTTGCTGTGGATCTGTATAACAAGATCAGGCATCATTTTGAAGCTGCAAGTTTTCTGGCTAATGTCAGAGAAAAAACAAATAAAAGCATTAAGGGCCTGGAGGATCTCCAAAGGACACTTCTGTCTGAGATGGGTGAAGAGACAGAAACCATTATTGGCAGTACATTTAAAGGAAGTTCTGAAATAAAGTGCAGGCTTGGACATAAAAGAGTTCTTCTGGTTGTGGATGATGTTGATTCTGTAAAACAATTGGAAGCATTAGCTGGAGGATATGATTGGTTTGGTCGTGGTAGCAGGATCATTATAACAACAAGAGATAAAGATGTTCTACATAAGCATGATGTTGAAATTAAAGGATATGAAATGGAGGAGCTAAATTATCATGAATCCCTTGAACTCTTTTGTTGGTATGCCTTTAATAGGAGCAGTCCTGCAGAAAACTTTGCTAGCATCTCTACTTCTGCAGTAAGATATGCAAAGGGTATTCCGTTGGCCTTAAGAGTAATAGGCTCCAATTTGAAGGGTAGGGGTCCTGAAAAATGGGAGACTGAATTACAGAAATATAGGAAGGTTCCAGATTCGGAGATTCAAGGTGTACTGGAAATAAGCTACACAAGCCTATCCAACTTGGACCAGAAAATTTTCCTGGACATTGCATGTTTCTTCAAAGGGGAAAGGTGGGATTATGTCAAAAGGATACTAGATGCTTGTGATTTCAACCCGGATATACAAGTATTTGTTAGTAAATGTCTCATATCTGTTGATGAAAACGGTTGCTTGGAAATGCATGATCTACTACAAGACATGGGTAGAGAGATTGTTCGGAAGGAATCGCCATCAAACCCTGGTTACCGCAGCAGATTATGGTCTCATAAAGATGTTCATGAAGTACTTAAAGAAAACTCTGGAAGTTATGCAGTTGAAGGAATAATGCTTTATCCCCAAAAACAAGAAAAAATAGATTATTGGACTATGACAGCCTTCAAGAAGATGAAGAACCTCAGAATTTTGATTGTTCGCAATGCAATATTTTCGTATGGTCCTAGTTATCTTCCAAATAGTTTACGGCTAATCGATTGGAAGGGGTACCCATCAAAGTCTTTTCCGCCAGATTTTTATCCCCACAGAATTGTTGACTTCAAGTTACCTCATAGTTCTCTGATATTTGAAAAGCCATTTCAGAGATTTGAGGATTTAACATTCATCAATCTTTGCCATTGTCAATTCATAACTCAAATTCCTGACCTGTCTGGAGCTAAAAGCTTGAAGGTACTTACACTTGATCAATGCTATAAACTGGCAAGGTTCGATAAATCCATTGGGTTTATGCCTAACCTTGTGTATTTAAGTGCTTCAGAGTGCACTCAGCTCACAAGTTTTGTGCCAAAGATGTATTTGCCCTCTCTCGAAGTGCTTTCATTTAATTTTTGCAGAAGACTTGAACACTTCCCACATGTAATGCACAAAATGGATAAGCCATTAAAGATATACATGATGAGTACTGCCATTAAAAAGATTCCGACATCCATTGGTAACCTTACTGGACTTGAGCATATGGACATGTCAGTTTGCAAAGAGCTTAAAAATCTGCCAAGTAGCTTCTTTTTGCTTCCAAAACTTGTCACTTTAAAAGTTGATGAATGCTCTCAACTTGGAGAATCATTTCAAAGGTTCCGAGAGAGTCGCCATTCAGTGGCAAATGGCAGTTCAAATTTAGTGACACTTCAGTTTCGTGAGACTAATCCATCATATGAAGATCTTTGTGCCATTCTTGAAATTTTTCCAAAATTAGAAGACTTAAATGTATCACACAACGGATTTGTAGCCCTACCAAACATCATCAGAGGATCTTCTCACTTGAAAAGTCTTGATGTGAGTTTCTGCAGGAATCTTAAGGAAATTCCAGAACTTCCCTTAAGTATTCAGAAAGTAGATGCAAGATACTGTCAGTCCTTAACTTCAGAGGCATCAAGCATGCTATGGTCTAAGGTCTCAGAAGAGATCCAAAGAATGCAAGTTGTAATGCCGATGCTGAAAAGAGAAATACCTGAATGGTTTGACTGCATTGGCACTAAAGATATTCCACATTTCTGGGCTCGCAGAAAGTTTCCCGTTGTTGCTTTATCATTAGTTTTCCAGGAACCGAAAAAGAAACTGTCTGATTTTGAACATGCGTTCCAGTCAGCTGTAGAATCGTTCACTGGATTTGTGAACTGGCACACTGTAAGCCTCCACTTGTTTATTGACGGACAAGAAATATATGGTAGAGATTACCACTGTTTCAACGTTGGAGAAGATCATGTGTTATTTTGTGATCTGCGAGTCTTGTTCAGGGATGAAGAGTGGCAGGGCCTTGACGCGAGCCTTGGAGATGATTGGAAGTCCATTCAGGTTCAATACGAATCAGACCTGATTCTGAGTCATTGGGGAGTTAATGTGTACGAGCAAGAAACAAACATGGATGATATCCAGTTCAGGTTTCCCATTCCCAGCTCCACTAGGAACTTAATTCCATCATCACTTTTGGTTCCAAAAGTTTGTCCAAAGCAGAAAATGAAACATATGCTGGAAAGTTTTGATCCACGAGACATCTTTAACATGAATCTGTCTCTGATAGAGTCAGAAGAAGGTCCAAGCAGGTCTGGAAAAGTACTTTTGAGGACCTGGAGGAATGCGAAGGCTGAGATTACCGAGGAAGCTTCAGTTTCAGTCTACGGGGCAAGTTTAAAGCAAGAACACGAAGAATCTGTTGACGATGTAGTAGAGGTTTTAGAGATGATAAAGGAGAATGTACCCAAACATTTTTCTGATTCAAACCCTGAAGAAATGCAATTGTTTGGTGGATTTGTAGAAAGATTGTTGAGGGCACGGGTAGAAGTAATGAAGGAAAACGGGTTGGACATGGGTATGCCTATTCTTCTAGAGTACACTGACGTAGGAGGATCTAAATATCGACGCTTTTGGGGAGTGTTGCAGTTAAAAGTGGGAGATCCATTTTACAAAGCAGTGTTGAGGAAATATAACCAACTTTCATGGGAATTTTCGACTAGCAACAGAGCCTCCAGCTCAGGCACGTGGTTTGAAAACTTGAGGATAACCATTGTTTTGTTGAAATGCTTGGATCCAGCCATGGAGGCAGCTTCAGGCTTTGGCTATGAGGAATCCTTGGAGGAAGGATACTACGATCCTGAATTGGCAGAATTAATGATGAGGATTGAGCAAGATGCCATGGGATTTAATAAATCTTACGGCAAAATGAAGGCATGTATTGTTCGAACCGATGAATCAGTTTCTCCACAGTATTTATTTGAGACATTAATGTTCAGAAGATTAATAGCTTTGGGAAAATTGACAACGTTTGGATTTATAACTAAGTTCAAGATAACACCGTATGGGAATATAAGGGTTGAGGACGATCCTTTCCGCATTCCGAAGACGTGCTTCTGGAGTTTGATCTTGGTTCTTCATCTACTTTTCTTCATAATCATATGGTTATTTTGTTTCGTAGGATATGTGGGGCTTTTTATTTGCAGGATACCAGTAATAGGAAAGATATTAGTGTGTGGTTGGTGGCTTCTCATGCAAGTTCTTGTGTCTTGTAAATACTTGTATCATAGAATGGGTAAGATTATGAAGATAAAGAAGAAGGACTTGTAA 4323 0.4016 MANHGDFTYDVFMSFKGENGTRYAFTDHLYRALLRHGINAFRDDQSLRSGDEIRPSLLQAIEASRISLVVLCQNYASSSWCLDELAKIIHCYENKGKHVVAIFYLVEPSDVRYQKNSYATAMSKHESRYGKDSEKVKTWRSALARVCDLTGIHYRNHMYETEVIEKIVKDTSAKLPPMPLQIKHLVGLDSRFERVKSLIDVESNDEVCILGIYGVGGIGKTTFAVDLYNKIRHHFEAASFLANVREKTNKSIKGLEDLQRTLLSEMGEETETIIGSTFKGSSEIKCRLGHKRVLLVVDDVDSVKQLEALAGGYDWFGRGSRIIITTRDKDVLHKHDVEIKGYEMEELNYHESLELFCWYAFNRSSPAENFASISTSAVRYAKGIPLALRVIGSNLKGRGPEKWETELQKYRKVPDSEIQGVLEISYTSLSNLDQKIFLDIACFFKGERWDYVKRILDACDFNPDIQVFVSKCLISVDENGCLEMHDLLQDMGREIVRKESPSNPGYRSRLWSHKDVHEVLKENSGSYAVEGIMLYPQKQEKIDYWTMTAFKKMKNLRILIVRNAIFSYGPSYLPNSLRLIDWKGYPSKSFPPDFYPHRIVDFKLPHSSLIFEKPFQRFEDLTFINLCHCQFITQIPDLSGAKSLKVLTLDQCYKLARFDKSIGFMPNLVYLSASECTQLTSFVPKMYLPSLEVLSFNFCRRLEHFPHVMHKMDKPLKIYMMSTAIKKIPTSIGNLTGLEHMDMSVCKELKNLPSSFFLLPKLVTLKVDECSQLGESFQRFRESRHSVANGSSNLVTLQFRETNPSYEDLCAILEIFPKLEDLNVSHNGFVALPNIIRGSSHLKSLDVSFCRNLKEIPELPLSIQKVDARYCQSLTSEASSMLWSKVSEEIQRMQVVMPMLKREIPEWFDCIGTKDIPHFWARRKFPVVALSLVFQEPKKKLSDFEHAFQSAVESFTGFVNWHTVSLHLFIDGQEIYGRDYHCFNVGEDHVLFCDLRVLFRDEEWQGLDASLGDDWKSIQVQYESDLILSHWGVNVYEQETNMDDIQFRFPIPSSTRNLIPSSLLVPKVCPKQKMKHMLESFDPRDIFNMNLSLIESEEGPSRSGKVLLRTWRNAKAEITEEASVSVYGASLKQEHEESVDDVVEVLEMIKENVPKHFSDSNPEEMQLFGGFVERLLRARVEVMKENGLDMGMPILLEYTDVGGSKYRRFWGVLQLKVGDPFYKAVLRKYNQLSWEFSTSNRASSSGTWFENLRITIVLLKCLDPAMEAASGFGYEESLEEGYYDPELAELMMRIEQDAMGFNKSYGKMKACIVRTDESVSPQYLFETLMFRRLIALGKLTTFGFITKFKITPYGNIRVEDDPFRIPKTCFWSLILVLHLLFFIIIWLFCFVGYVGLFICRIPVIGKILVCGWWLLMQVLVSCKYLYHRMGKIMKIKKKDL 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05458 1440 Pfam TIR domain 9 182 IPR000157 GO:0007165
Viun3g05458 1440 Gene3D Ribonuclease Inhibitor 719 895 IPR032675 -
Viun3g05458 1440 Gene3D Ribonuclease Inhibitor 541 718 IPR032675 -
Viun3g05458 1440 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 176 - -
Viun3g05458 1440 ProSiteProfiles TIR domain profile. 7 175 IPR000157 GO:0007165
Viun3g05458 1440 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 770 IPR044974 GO:0006952
Viun3g05458 1440 PRINTS Disease resistance protein signature 209 224 - -
Viun3g05458 1440 PRINTS Disease resistance protein signature 381 395 - -
Viun3g05458 1440 PRINTS Disease resistance protein signature 733 749 - -
Viun3g05458 1440 PRINTS Disease resistance protein signature 287 301 - -
Viun3g05458 1440 Gene3D - 346 430 IPR042197 -
Viun3g05458 1440 Gene3D - 7 174 IPR035897 -
Viun3g05458 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Viun3g05458 1440 Gene3D - 175 341 IPR027417 -
Viun3g05458 1440 SMART till_3 8 149 IPR000157 GO:0007165
Viun3g05458 1440 Pfam NB-ARC domain 192 409 IPR002182 GO:0043531
Viun3g05458 1440 SUPERFAMILY L domain-like 498 882 - -
Viun3g05458 1440 Coils Coil 1132 1152 - -
Viun3g05458 1440 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 151 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05458 Viun-Chr3 60552944 60558393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05458 9 783 WRKY Transcription Factor Family AT4G12020 30.227 3.09e-86 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05458 - - vum:124827448 1737.24