Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05455 ATGGCAATTTCAGGGTCAGAGACTCAGAGTTCGTCCTCACTGAAAATTGTGTCTCAGGTGGAAGTGGAGTGCGTGAAATGCGACTCGTGCGGGTTCACAGAGGAATGCACCCCTGCGTACATCTCGAGGGTGCGTCAGAGGTACCAGGGTCGGTGGCTCTGTGGGCTGTGTGTGGAGGCTGTGAAACACGAGGTGGTAAGATCAGAAAGTGTCATCACCACCGAAGAAGCCCTGGACCGCCACATCACTTTCTGTAGAGAGTTCCGATCATCCACCGTTCTCAACGAAACTGAGCACCCCATCTTCGCCATGGGACGCCTCCTCCGCCGGAGCCTCGATTCTCCCAAGCCGCTCCGATCGAACTCTACGGGAGCTCTCGGGGTTAAAACCCTGCAATTGATTCGATCCGAGAGTTGCTTCTCTTCAATCTCCGGCTAA 438 0.5502 MAISGSETQSSSSLKIVSQVEVECVKCDSCGFTEECTPAYISRVRQRYQGRWLCGLCVEAVKHEVVRSESVITTEEALDRHITFCREFRSSTVLNETEHPIFAMGRLLRRSLDSPKPLRSNSTGALGVKTLQLIRSESCFSSISG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05455 145 PANTHER OS01G0745000 PROTEIN 11 144 IPR012876 -
Viun3g05455 145 Pfam Protein of unknown function (DUF1677) 22 110 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05455 Viun-Chr3 60527047 60529058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05455 - - gmx:100797385 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05455 3 60527047 60529058 Viun9g03222 9 39338361 39339851 ECH
Viun3g05455 3 60527047 60529058 Viun8g00668 8 5365885 5367285 ECH
Viun3g05455 3 60527047 60529058 Viun3g05455 3 60527047 60529058 ECH