Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05262 ATGTCGGTAACCGTGAAAGAAAGCTGCACTGTGAGGCCAATGGAGCCAACGTGGTGCGGACGCGTAGCTTTATCTGAATTTGATCAAACAGGCAAAGTAACCCACGTGCCCTTAATCTACTTCTACCGTCTTCCACAAAACGCCATTTTTCAATATAACACCATTGCTTCCACCTTGAAGGACTCATTAAGCCGAGTCCTGGTGCCGTTTTATCCACTTGCCGGTCGTTTGCATTGGACAAACAATGGACGTTTAGAACTTGATTGCAACGCCACCGGCATTCGATTCATTGAAGCTGAATCCTCATCAACTTTACAACATCTCACTGATTTTTCATCTTCTAATGAACACCACTACCTAGTCCCTGCTGTGGACTACTACTCCCTCCCAATTCATGAGTTGCCGTTGGTTGTGGTTCAGCTAACGAAGTTCAAGTGCGGTGGCATTTGTATTGGCATAACACTTTCGCACGCAGTTGTGGATGGACCAAGTGCGCTGCACTTCGTATCCGAGTGGGCAAGGCTTTCACGGGGCGAGCCTCTGCATACGGTGCCATTCCTTGATCGGAAAATTTTACGTGCTGGGGAGCCTCCTTTGGTGCCACTAACAAAATGTCACCTTCACAAGGAGTTCAATGATCCTCCTTTCTTGCTGGGCCGAACCGATAACAGGGAGGAAAGGGAGAAGGAAACCGCAATGGCTTTCGTTAAAATAAGCAAAACCGAAATTGAAACATTGAAAAAGAGAGCAAATGAGAGTTCGCCTAGGCCTAGAAATGATCGTGGTTATTCCCGTTATGAGAGTGTGACTGGTCACATATGGAGATGTGCAAGCAAGGCAAGGGAGCACAAAGAGAACCAACCAACCGTTCTTACTATTATCGTTGATTCGAGGGGTCGCTTGAAACCTCCTTTGCCAAATGGGTACTTCGGGAATGCAAATTTGGATAGTGTTGCATGTAGTCTTGCGGGTGATTTGGTGTCAGAGCCTTTGGGGTATACGGCGAGCAGAATAAGGGAGGCAATTGAGAGGGTGAGCGATGAGTACGTGAGGTCTGGGATTGAGTTCTTGAAGAATCAGAAGAATTTAAGAAGGTTTCATCAAGATCTTCACGAAGAAGGGAGAGAGAAGGAGCCTTTCTTTGGGAACCCTAATTTGTCTGTGGTGAGTTGGTTGAGGTTGCCTATCTATGGCATTGATTTTGGGTGGGGGAAGGAGGTTCGTATGAGTCCAGCAACACATGACTTCGATGGCGATTTCGTGCTTCTTCCTGATCCTAATGAGGATGGATCTGTGCTGGTTTGTATAGGTCTGCAGGTGGTGCATATTGATGCATTTAAGAAGCATTTTTACCAGGACCTTGCATAA 1368 0.4656 MSVTVKESCTVRPMEPTWCGRVALSEFDQTGKVTHVPLIYFYRLPQNAIFQYNTIASTLKDSLSRVLVPFYPLAGRLHWTNNGRLELDCNATGIRFIEAESSSTLQHLTDFSSSNEHHYLVPAVDYYSLPIHELPLVVVQLTKFKCGGICIGITLSHAVVDGPSALHFVSEWARLSRGEPLHTVPFLDRKILRAGEPPLVPLTKCHLHKEFNDPPFLLGRTDNREEREKETAMAFVKISKTEIETLKKRANESSPRPRNDRGYSRYESVTGHIWRCASKAREHKENQPTVLTIIVDSRGRLKPPLPNGYFGNANLDSVACSLAGDLVSEPLGYTASRIREAIERVSDEYVRSGIEFLKNQKNLRRFHQDLHEEGREKEPFFGNPNLSVVSWLRLPIYGIDFGWGKEVRMSPATHDFDGDFVLLPDPNEDGSVLVCIGLQVVHIDAFKKHFYQDLA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05262 455 Gene3D - 1 212 IPR023213 -
Viun3g05262 455 Pfam Transferase family 1 452 - -
Viun3g05262 455 Gene3D - 220 453 IPR023213 -
Viun3g05262 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 439 - -
Viun3g05262 455 FunFam Tryptamine hydroxycinnamoyl transferase 219 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05262 Viun-Chr3 59156325 59157707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05262 1 452 Monolignol Biosynthesis Gene Families AT5G48930 36.504 2.37e-104 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05262 K13065 - gmx:100777532 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05262 3 59156325 59157707 Viun3g05262 3 59156325 59157707 ECH