Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05261 ATGTCGGTAACCGTGAAAGCAAGCTGCACTGTGAGGCCAATGGAGGCAACATGGTGCGGACGCTTAGCTTTATCTGAATTGAATCAAACAGGCACTGTAGGTCACCAGGCCTTAGTCTACTTCTACAGTCTTCCACAAAACTGCCTCTCTCAATACAACACCATTGCTTCCACCTTGAAGGACTCATTGAGCAGAGTCCTGGTGCCGTTTTATCCACTTGTCGGTCGTTTGCATTGGACAAACAATGGACGTTTAGAACTTGATTGCAATGCCACCGGCGTTCCATTCATTGAAGCAGAGTCCTCATCAACTGTACAACATCTCTCTCATTTTTCATCTTCTTCGGAATACCACTACCTTGCCCCCACTGTGGACTACTACTCCCTCCCAATTCACGAGTTGCCGTTGCTTGTGGTTCAGCTGACCAAGTTCAAGTGCGGTGGCATTTCTGTTGGCATAACATTTTCGCACGCAGTTGTGGATGGATCAAGTGCATTCCACTTCATACGTGAGTGGGCAAGGTTTGCACGGGGCGAGTCTCTGCATACGGTTCCATTCCTTGACCGGAAAGTTTTACGTGCTGGAGAGCCTCCTTTGATGCCACTAACAAAATGTCACGTTCTTGAGAAACTCAATGATCCTCCCTTGTTGCTGGGCCGAACTGATAACAGGGAGGAAAAGGAGAAGAAAACCACAATGGTTTTCCTTAAAATAAGCAAAACTCAAATTGAAACATTGCAAAAGAGAGCAAATGAGAGTTCGCCTAAGCCTAGAAATGATGGTGGTTATTCCCGTTATGAGAGTGTGACTGGTCACATATGGAGATGTGCAAGCAAGGCAAGGAAGCACAAAGAAAACCAACCAACTGAGCTTAATGTTACCGTTGACTTGAGGGGTCGCATGAAACCTCCTTTGCCAAAAGCGTACTTCGGAAATGCCATTTTGGATAGTGTTACATGTTGTCTTGCGGGTGATTTGGTGTCAGAGCCTTTAGGGTATACGGCGAGTAGAATAAGGGAGGCGATTGAGAGGGTTAGCGATGAGTACGTGAGGTCGGAGATTGAGTTCTTGAAGAATCAGAAGAATTTGAGAAGGTTTCATCGAGATTTTCATGAAGAAGGAAGAGAGAGGGAGCCTTTCTATGGGAATCCCAATTTGTCTGTGGTGAGTTGGTTGAGGTTGCCTATCTATGGCATTGATTTTGGGTGGGGGAAGGAGGTTCGTATGAGCCGAGCTACACATGACTTCGATGGCGATTTCGTTCTTCTTCCTGATCCTGATGAGGATGGATCTGTGCTGGTTTGTATGGGTCTGCAAGTGCTGCATATTGACGCTTTTAAAAAGCATTTTTACCAGGACATTCAAGGTTATAAATCCAATTTATAA 1386 0.456 MSVTVKASCTVRPMEATWCGRLALSELNQTGTVGHQALVYFYSLPQNCLSQYNTIASTLKDSLSRVLVPFYPLVGRLHWTNNGRLELDCNATGVPFIEAESSSTVQHLSHFSSSSEYHYLAPTVDYYSLPIHELPLLVVQLTKFKCGGISVGITFSHAVVDGSSAFHFIREWARFARGESLHTVPFLDRKVLRAGEPPLMPLTKCHVLEKLNDPPLLLGRTDNREEKEKKTTMVFLKISKTQIETLQKRANESSPKPRNDGGYSRYESVTGHIWRCASKARKHKENQPTELNVTVDLRGRMKPPLPKAYFGNAILDSVTCCLAGDLVSEPLGYTASRIREAIERVSDEYVRSEIEFLKNQKNLRRFHRDFHEEGREREPFYGNPNLSVVSWLRLPIYGIDFGWGKEVRMSRATHDFDGDFVLLPDPDEDGSVLVCMGLQVLHIDAFKKHFYQDIQGYKSNL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05261 461 Pfam Transferase family 1 452 - -
Viun3g05261 461 FunFam Tryptamine hydroxycinnamoyl transferase 219 451 - -
Viun3g05261 461 Gene3D - 1 206 IPR023213 -
Viun3g05261 461 Gene3D - 220 453 IPR023213 -
Viun3g05261 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 439 - -
Viun3g05261 461 MobiDBLite consensus disorder prediction 246 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05261 Viun-Chr3 59137493 59139361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05261 1 452 Monolignol Biosynthesis Gene Families AT5G48930 36.283 2.78e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05261 K13065 - gmx:100777532 644.81