Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05260 ATGAAATCTTCTTGTTCTAGGGTTCGACACAGAACTTCGTGTGAATATGGGCGTCAGTGTTCTCACTGGTTCCGGTATTGTTGCCTAGCGTCACGCTCCATCAACCCTCCACTATGCCCGACACCAACGTTACGGTCACCAACGATTCTCAATGGGTTCGTCATCTCGCTCTCTGGACAACAAGGGCAGATCGTCGGAGGAATGGTAGCTAGCGGGTTGATTGCTGCGAGAACGATGTTCGTGATCGTTGCATCGTTCAACAACCCAAACCTCTGTGTGCGAGAACAATTTAAGCAATTTCTAGCTGCATACGAGGATTCACGTGTGTTGTATGCAAGGATATAG 345 0.487 MKSSCSRVRHRTSCEYGRQCSHWFRYCCLASRSINPPLCPTPTLRSPTILNGFVISLSGQQGQIVGGMVASGLIAARTMFVIVASFNNPNLCVREQFKQFLAAYEDSRVLYARI 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05260 114 Pfam Plants and Prokaryotes Conserved (PCC) domain 49 88 IPR005175 -
Viun3g05260 114 SUPERFAMILY AF0104/ALDC/Ptd012-like 52 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05260 Viun-Chr3 59105253 59107229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05260 38 105 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 48.611 7.69e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05260 - - vun:114176334 237.269