Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05259 ATGTCGGTAACCGTGAAAGCAAGCTGCACTGTGAGGCCAATGGAGGCAACATGGTGCGGACGCATAGCTTTATCTGAATTGGATCAAACAGGCACTGTAGGTCACCAGGCCTTAGTCTACTTCTACAGTCTTCCACAAAACTGCCTCTCTCAATACAACACCATTGCTTCCACCTTGAAGGACTCATTGAGCAGAGCCCTGGTGCCGTTTTATCCAATTGCCGGTCGTTTGTATTGGATAAACAATGGACGTTTAGAACTTGATTGCAATGCCACCGGCGTTCAATTCATTGAAGCAGAGTCCTCATCAACTGTACAACATCTCTCTCATTTTTCATCTTCTTCGGAATACCACTACCTTGTCCCCACTGTGGACTACTACTCCCTCCCAATTCACGAGTTGCCGTTGTTTGCGGTTCAGCTGACCAAGTTCAAGTGCGGTGGAATTTGTGTTGGCATAACATTTTCGCACGCAATTATGGATGGATCAAGTGCATTCCACTTCATACGTCAGTGGGCAAAGTTTGCACGGGGCGGGCCTCTGCATACGGTGCCATTCCTTGATCGGAAAATTTTACGTGCTGGAGAGCCTCCTTTGGTGCCACTAACAAAATGTCACGTTCTTGCGAAACTCAATGATCCTCCCTTGTTGCTGGGCCGAACTGATGACAGGGAGGAAAAGGAGAAGAAAACCACAATAACTTTCCTTAAAATAAGCAAAACTCAAATTGAAACATTGCAAAAGAGAGCAAATGAGAGTTCTCCTAAGCCTATAAATGATGGTGGTTATTCCCGTTATGAGAGTGTGACTGGTCACATATGGAGATGTGCAAGCAAGGCAAGGAAGCACAAAGAAAACCAACCAACTGAGCTTACTGTTACTGTTGACTTGAGGGGTCGCATGAAACCTCCATTGCCAAATGGGTACTTCGGGAATGCCATTTGGGATAGTGTTGCATGTTGTCTTGCGGGTGATTTGGTGTCAGAGCCTTTGGGGTATACGGCGAGCAGAATAAGGGAGGCAATTGAGAGGGTGAGCGATGAGTACGTGAGGTCTGGGATTGAGTTCTTGAAGAATCAGAAGAATTTAAGAAGGTTTCATCAAGATCTTCACGAAGAAGGGAGAGAGAAGGAGCCTTTCCCTGGGAACCCTAATTTATCTGTGGTGAGTTGGTTTAGGTTACCTATCAATGGCATTAATTTTGGGTGGGGGAAGGAGGTTCGTATGAGTCCAGCAACACATGGCTTCGATGGCGATTTCGTGCTTCTTCCTGATCCTGATGAGAATGGATCTGTGCTGGTTTATATACGTCTACAATTGCTGCATATTGACGCTTTTAAAAAGCATTTTTACCAGGACATTCAAGGTTATAAATCCAATTTATAA 1386 0.4517 MSVTVKASCTVRPMEATWCGRIALSELDQTGTVGHQALVYFYSLPQNCLSQYNTIASTLKDSLSRALVPFYPIAGRLYWINNGRLELDCNATGVQFIEAESSSTVQHLSHFSSSSEYHYLVPTVDYYSLPIHELPLFAVQLTKFKCGGICVGITFSHAIMDGSSAFHFIRQWAKFARGGPLHTVPFLDRKILRAGEPPLVPLTKCHVLAKLNDPPLLLGRTDDREEKEKKTTITFLKISKTQIETLQKRANESSPKPINDGGYSRYESVTGHIWRCASKARKHKENQPTELTVTVDLRGRMKPPLPNGYFGNAIWDSVACCLAGDLVSEPLGYTASRIREAIERVSDEYVRSGIEFLKNQKNLRRFHQDLHEEGREKEPFPGNPNLSVVSWFRLPINGINFGWGKEVRMSPATHGFDGDFVLLPDPDENGSVLVYIRLQLLHIDAFKKHFYQDIQGYKSNL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05259 461 Gene3D - 220 453 IPR023213 -
Viun3g05259 461 FunFam Tryptamine hydroxycinnamoyl transferase 219 451 - -
Viun3g05259 461 Pfam Transferase family 1 452 - -
Viun3g05259 461 Gene3D - 1 206 IPR023213 -
Viun3g05259 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05259 Viun-Chr3 59101041 59102966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05259 1 452 Monolignol Biosynthesis Gene Families AT5G48930 35.619 1.33e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05259 K13065 - gmx:100777532 628.246