Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05258 ATGTCGGTAACCGTGAAAGCAAGCTGCACTGTGAGGCCAATGGAGGCAACATGGTGCGGACGCTTAGCTTTATCTGAATTGGATCAAACAGGCAATATAGGCCAAGTGTCCTTCGTCTACTTCTACCATCTTCCACAAAACTGCCTCTCTCAATACAACACCATTGCTTCCACCTTGAAGGACTCATTGAGCAGAGTCCTGGTGCCGTTTTATCCACTTGCCGGTCGTTTGCATTGGACAAACAATGGACGTTTAGAACTTGATTGCAATGACACCGGCGTTCCATTCATTGAAGCAGAGTCCTCATCAACTGTACAACATCTCTCTCATTTTTCATCTTCTTCGGAATACCACTACCTTGTCCCCATTGTGGACTACTACTCCCTCCCAATTCACGAGTTGCCGTTGCTTGTGGTTCAGCTGACCAAGTTCAAGTGCGGTGGCATTTGTGTTGGCATAACAGTTTCGCACGCAGTTGTGGATGGATCAAGTACATTCCACTTCATACGTGAGTGGGCAAGGTTTGCACGGGGCGAGTCTCTGCATACGGTGCCATTCCTTGACCGGAAAGTTTTACGTGCTGGAGAGCCTCCTTTGGTGCCACTAACAAAATGTCACGTTCTTGAGAAACTCAATGATCCTCCCTTGTTGCTGGGCCGAACTGATAACAGGGAGGAAAAGGAGAAGAAAACCACAATGGCTTTCCTTAAAATAAGCAAAACTCAAATTGAAACATTGCAAAAGAGAGCAAATGAGAGTTCGCCTAAGCCTATAAATGATGGTGGTTATTCCCGTTATGAGAGTGTGACTGGCCACATATGGAGATGTGCAAGCAAGGCAAGGAAGCACAAAGAAAACCAACCAACTGAGCTTAATGTTACCGTTGACTCGAGGGGTCGCATGAAACCTCCTTTGCCAAAAGCGTACTTCGGAAATGCCATTTTGGATAGTGTTACATGTTGTCTTGCGGGTGATTTGGTGTCAGAGCCTTTAGGGTATACGGCGAGTAGAATAAGGGAGGCGATTGAGAGGGTTAGCGATGAGTATGTGAGGTCGGAGATTGAGTTCTTGAAGAATCAGAAGAATTTGAGAAGGTTTCATCGAGATTTTCATGAAGAAGGAAGAGAGAGGGAGCCTTTCTATGGGAATCCCAATTTGTCTGTGGTGAGTTGGTTGAGGTTGCCTATCTATGGCATTGATTTTGGGTGGGGGAAGGAGGTTCGTATGAGTTCAGCAACACATGACTTCGATGGCGATTTCGTGCTTCTTCCTGATCCTGATGAGGATGGATCTGTGCTGGTTTGTATGGGTCTGCAAGTGCTGCATATTGACGCTTTTAAAAAGCATTTTTACCAGGACATTCAAGGTTATAAATCCAATTTATAA 1386 0.4553 MSVTVKASCTVRPMEATWCGRLALSELDQTGNIGQVSFVYFYHLPQNCLSQYNTIASTLKDSLSRVLVPFYPLAGRLHWTNNGRLELDCNDTGVPFIEAESSSTVQHLSHFSSSSEYHYLVPIVDYYSLPIHELPLLVVQLTKFKCGGICVGITVSHAVVDGSSTFHFIREWARFARGESLHTVPFLDRKVLRAGEPPLVPLTKCHVLEKLNDPPLLLGRTDNREEKEKKTTMAFLKISKTQIETLQKRANESSPKPINDGGYSRYESVTGHIWRCASKARKHKENQPTELNVTVDSRGRMKPPLPKAYFGNAILDSVTCCLAGDLVSEPLGYTASRIREAIERVSDEYVRSEIEFLKNQKNLRRFHRDFHEEGREREPFYGNPNLSVVSWLRLPIYGIDFGWGKEVRMSSATHDFDGDFVLLPDPDEDGSVLVCMGLQVLHIDAFKKHFYQDIQGYKSNL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05258 461 Coils Coil 454 461 - -
Viun3g05258 461 Gene3D - 220 453 IPR023213 -
Viun3g05258 461 FunFam Tryptamine hydroxycinnamoyl transferase 219 451 - -
Viun3g05258 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 439 - -
Viun3g05258 461 Pfam Transferase family 1 452 - -
Viun3g05258 461 Gene3D - 1 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05258 Viun-Chr3 59085703 59087565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05258 1 452 Monolignol Biosynthesis Gene Families AT5G48930 36.283 1.24e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05258 K13065 - gmx:100777532 645.58