Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05246 ATGGAAGGGCAAGTGGCTAAACGCAGACGTGTGTACTCTGTGGAACCAAACCAGATAGTGCAATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCAGCGTTGGTGAAGATGAAGGAGAAAGATAGAAGCCATTGTGATATTAACCGTGCTGTGAAGTATGAGGTGGACATGGCAATGGTGTTGTCAGCACAAGGTTTTGCATGGAGTAACGGCCTCAAAGTCAAGCTTCAAAACGATCGTGTTCGTGTCAATGCAGCTAAAAGCTCTACGTTTCTTGAAAATGGGGCTGGTGAAGGTTCATCAAGTGGTTGTGAGGACAATGAGGTTGTCCCAATGGAATTCTCTTCAAACCCTAGCTCGAAGCCTAGGTGCAAGGACATGTCAGAAATGAAAAGGGATTTGGCCAGAGAAGATGATGATGATGATGATGATGAAGATGGGGACATGGAGGAGCAGTGGAAGAGGCTGAGGAGGTTGATACCTGGAGGAGAAAAGATGTGTGATGAACAAATGGCTAAAGAGCTTGAGAGTTACATAAGCTGTTTGCAAATGCAGGTGAACGCTCTACAGTTTCTGCTGCCACAGACTCGTTAA 600 0.445 MEGQVAKRRRVYSVEPNQIVQSIFTRNYLNHLVPALVKMKEKDRSHCDINRAVKYEVDMAMVLSAQGFAWSNGLKVKLQNDRVRVNAAKSSTFLENGAGEGSSSGCEDNEVVPMEFSSNPSSKPRCKDMSEMKRDLAREDDDDDDDEDGDMEEQWKRLRRLIPGGEKMCDEQMAKELESYISCLQMQVNALQFLLPQTR 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05246 199 CDD bHLH_AtIBH1_like 154 195 IPR044549 GO:0006355
Viun3g05246 199 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 194 IPR044660 GO:0006355
Viun3g05246 199 MobiDBLite consensus disorder prediction 94 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05246 Viun-Chr3 59009472 59010584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05246 1 78 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 50.633 3.85e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05246 - - gmx:100813719 288.885