Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05245 ATGGAAGGGCAAGTGGCTAAACGCAGACGTGTGTACTCTGTGGAACCAAACCAGATAGTGCAATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCAGCGTTGGTGAAGATGAAGGAGAAAGATAGAAGCCATTGTGATATTAACCGTGCTGTGAAGTATGAGGTGGACATGGCAATGGTGTTGTCAGCACAAGGTTTTGCATGGAGTAACGGCCTCAAAGTCAAGCTTCAAAACGATCGTGTTCGTGTCAATGCAGCTAAAAGCTCTACGTTTCTTGAAAATGGGGCTGGTGAAGGTTCATCAAGTGGTTGTGAGGACAATGAGGTTGTCCCAATGGAATTCTCTTCAAACCCTAGCTCGAAGCCTAGGTGCAAGGACATGTCAGAAATGAAAAGGGATTTGGCCAGAGAAGATGATGATGATGATGATGATGAAGATGGGGACATGGAGGAGCAGTGGAAGAGGCTGAGGAGGTTGATACCTGGAGGAGAAAAGATGTGTGATGAACAAATGGCTAAAGAGCTTGAGAGTTACATAAGCTGTTTGCAAATGCAGATGGTGGGTTGTTTTTGGCACTAG 585 0.4427 MEGQVAKRRRVYSVEPNQIVQSIFTRNYLNHLVPALVKMKEKDRSHCDINRAVKYEVDMAMVLSAQGFAWSNGLKVKLQNDRVRVNAAKSSTFLENGAGEGSSSGCEDNEVVPMEFSSNPSSKPRCKDMSEMKRDLAREDDDDDDDEDGDMEEQWKRLRRLIPGGEKMCDEQMAKELESYISCLQMQMVGCFWH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05245 194 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 188 IPR044660 GO:0006355
Viun3g05245 194 MobiDBLite consensus disorder prediction 94 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05245 Viun-Chr3 59009462 59011019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05245 1 78 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 50.633 3.46e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05245 - - gmx:100813719 276.559