Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05244 ATGGAAGGGCAAGTGGCTAAACGCAGACGTGTGTACTCTGTGGAACCAAACCAGATAGTGCAATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCAGCGTTGGTGAAGATGAAGGAGAAAGATAGAAGCCATTGTGATATTAACCGTGCTGTGAAGTATGAGGTGGACATGGCAATGGTGTTGTCAGCACAAGGTTTTGCATGGAGTAACGGCCTCAAAGTCAAGCTTCAAAACGATCGTGTTCGTGTCAATGCAGCTAAAAGCTCTACGTTTCTTGAAAATGGGGCTGGTGAAGGTTCATCAAGTGGTTGTGAGGACAATGAGGTTGTCCCAATGGAATTCTCTTCAAACCCTAGCTCGAAGCCTAGGTGCAAGGACATGTCAGAAATGAAAAGGGATTTGGCCAGAGAAGATGATGATGATGATGATGATGAAGATGGGGACATGGAGGAGCAGTGGAAGAGGCTGAGGAGGTTGATACCTGGAGGAGAAAAGATGTGTGATGAACAAATGGCTAAAGAGCTTGAGAGTTACATAAGCTGTTTGCAAATGCAGCACCTAGCTATCCGGAGAATTGGTTTGGCCTTGTTTACGCATTCTACGAAGTGTCCTTTTAGGAGCAGCAAAGTGATGCATCATTAA 648 0.4414 MEGQVAKRRRVYSVEPNQIVQSIFTRNYLNHLVPALVKMKEKDRSHCDINRAVKYEVDMAMVLSAQGFAWSNGLKVKLQNDRVRVNAAKSSTFLENGAGEGSSSGCEDNEVVPMEFSSNPSSKPRCKDMSEMKRDLAREDDDDDDDEDGDMEEQWKRLRRLIPGGEKMCDEQMAKELESYISCLQMQHLAIRRIGLALFTHSTKCPFRSSKVMHH 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05244 215 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 193 IPR044660 GO:0006355
Viun3g05244 215 MobiDBLite consensus disorder prediction 94 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05244 Viun-Chr3 59009458 59011336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05244 1 78 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 50.633 7.14e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05244 - - gmx:100813719 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05244 3 59009458 59011336 Viun9g00312 9 2084749 2085798 PCT