Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05207 ATGGAACAACAACAATCTACACAACACCACAACCACGACTTCATCTTCCGTTCCAAACTCCCCGACATTTACATTCCCACGCACCTCCCTCTCCACACTTACATCTTCCAAAACCTCACCCAATTCAACCACCGACCCTGCCTCATAAACGCCGCCACCGGAGACTGCTTCACCTACGCCGACGTCCAACTCACCGCTCGCAGAGTCGCCGCCGGCCTCCACAAACTCGGCATCCAGCACGGCGACGTCATCCTCCTTCTCCTCCAGAACTGCCCCCAGTTTGTCTTCGCATTCCTGGGCTCCTCCTTCTGCGGCGCCACCGTCACCACCGCTAACCCCTTCTACACTCCGGCGGAGGTGGCCAAGCAAGCCGCGGCCTCCAACGCCAAACTCATCATAACACAAGCGTCGTACGTGGACAAAGTGAAGGATTTCGCGAGGGAAAACGACGTCAGAGTGATGTGCGTTGACGCGGCGCTGGAAGGTTACCTTCACTTCTCGGAGTTAACGGAGGCAAACGAGAATGACATTCCCGGCGTTAAAATATCCCCGGACGACGTGGTTGCGCTGCCGTATTCTTCAGGAACGACGGGGCTTCCGAAGGGAGTGATGCTAACGCACAAGGGGATGGTTACGAGCGTGGCGCAACAAGTGGACGGAGAGAACCCTAATCTGTATATACGTAGCGAGGACGTGGTGTTGTGCGTGCTTCCACTGTTCCATATTTATTCCCTCAACACTGTTTTGCTCTGTTCCCTTCGGGTTGGGGCTGCAGTTTTGATAATGCCCAAATTCGATATGGTGAAGATGCTGGAGCTGGTGGAAAAACACAAAGTGAGTGTGGCGCCGTTTGTGCCACCCATCATTCTGGCGGTTGCGAAGAGTCCAGATTTGCAGCGTTACGACCTTTCCTCGATTCGAATGATAATGTCTGGCGCCGCTCCTGTGGGGAAGGAACTTGAGGACTCCCTCAGAGACAAACTTCCCAACGCCACACTTGGTCAGGGTTATGGGATGACAGAAGCAGGACCAGTGCTTTCAATGTGCTTAGCGTTTGCGAAGGAAGCAGGGCATGTGAAATCAGGTTCGTGCGGGACCGTTGTAAGAAATGCAGAGATGAAGATCGTTGACCCTCTCACTGCTGCTTCGCTTCACACGAATCAACCTGGTGAGATTTGTATCAGAGGCAACCAGATCATGAAAGGTTACCTAAACGATGAAGAGGCCACAAAAATAACTATAGACGAAGAAGGATGGTTGCATACGGGTGATATTGGATACATCGACGATGATGACCAGATTTTCATCGTTGATCGGTTGAAGGAGTTGATCAAATACAAAGGATTTCAAGTTGCTCCTGCTGAGCTCGAAGCCATGCTACTTGTGCACCCAAAGATTTCTGATGCTGCTGTTGTGTCCATGAAGGATGAAGTTGCAGGTGAGGTTCCAGTTGCATTTGTTGTACTATCAAACGGTTCTACGATCTCTGAGGAAGAAATCAAGCAGTACATCTCAAAGCAGGTTGTGTTTTACAAAAGAATCAGTAGGGTTTTCTTTGTGAGTTCAATTCCGAAGGCAGCCTCTGGAAAGATCTTGCGAAGGGAACTGAGGGCAAGGCTTGCAAATGGTCTTCCTTCATTGTGA 1644 0.5091 MEQQQSTQHHNHDFIFRSKLPDIYIPTHLPLHTYIFQNLTQFNHRPCLINAATGDCFTYADVQLTARRVAAGLHKLGIQHGDVILLLLQNCPQFVFAFLGSSFCGATVTTANPFYTPAEVAKQAAASNAKLIITQASYVDKVKDFARENDVRVMCVDAALEGYLHFSELTEANENDIPGVKISPDDVVALPYSSGTTGLPKGVMLTHKGMVTSVAQQVDGENPNLYIRSEDVVLCVLPLFHIYSLNTVLLCSLRVGAAVLIMPKFDMVKMLELVEKHKVSVAPFVPPIILAVAKSPDLQRYDLSSIRMIMSGAAPVGKELEDSLRDKLPNATLGQGYGMTEAGPVLSMCLAFAKEAGHVKSGSCGTVVRNAEMKIVDPLTAASLHTNQPGEICIRGNQIMKGYLNDEEATKITIDEEGWLHTGDIGYIDDDDQIFIVDRLKELIKYKGFQVAPAELEAMLLVHPKISDAAVVSMKDEVAGEVPVAFVVLSNGSTISEEEIKQYISKQVVFYKRISRVFFVSSIPKAASGKILRRELRARLANGLPSL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05207 547 Gene3D - 6 440 IPR042099 -
Viun3g05207 547 Gene3D - 441 543 IPR045851 -
Viun3g05207 547 FunFam 4-coumarate--CoA ligase 2 442 543 - -
Viun3g05207 547 CDD 4CL 25 536 - -
Viun3g05207 547 Pfam AMP-binding enzyme 39 446 IPR000873 -
Viun3g05207 547 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 441 - -
Viun3g05207 547 SUPERFAMILY Acetyl-CoA synthetase-like 11 543 - -
Viun3g05207 547 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Viun3g05207 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 538 - -
Viun3g05207 547 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05207 Viun-Chr3 58635515 58642057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05207 1 508 Monolignol Biosynthesis Gene Families AT1G51680 67.054 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05207 K01904 - gmx:100779668 898.271