Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05196 ATGCAGAAACCATCTACCGACGCAATTAGTATGGGCAAAAGGAGCCTGGAGGGTGGAGAAGATGATCAGCCTGAACGAAAAAGGCCTGCTCTCGCAAGTGTAATTGTTGAAGCACTTAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAGCCTATTCTACGGAGAGTTGTGAGTGAAGAGGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGAATTGGTGGAAGGTCTCCACCTAAAATGATTGAAGGCCCTGAAGGTAGAAACTTGCAGCTGCAATTTAAGTCCCGGCTGTCTCTTCCCCTCTTCACAGGAGGAAAAGTAGAAGGCGAGCGGGGGGCTCCAATACATGTTGTTCTGATTGATGCCAACAGTGGAAGCGTTGTAACATCTGGACCTGAATCCTCTGTTAAGCTTGATGTTGTTGTCCTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACCCAAGATCATTTTGAAAGCCATGTGGTAAAAGAACGTGAAGGAAAGAGACCTTTATTAACTGGAGACTTGCAAGTGACACTCAAGGAAGGAGTTGGAACATTAGGGGAACTGACCTTTACTGATAATTCAAGCTGGATACGGAGCCGCAAATTCCGGCTTGGCCTGAAGGTTGCCTCAGGCTTTTGTGAGTCCGTACGCATTCGTGAAGCTAAGACAGTGGCTTTCAATGTTAAAGATCATAGAGGAGAATTATATAAGAAGCACTACCCTCCTGCATTGAATGATGAAGTGTGGAGATTGGAGAAGATAGGCAAGGATGGATCATTTCACAAGAAGCTGAATAATGCAGGAATCGTCACAGTTGAAGACTTTCTTCGGCTCGTGGTTAAAGATCAACAGAAATTGCGGAATATCCTTGGAAGTGGTATGTCAAACAAGATGTGGGAGGCTCTTTTAGAGCATGCAAAAACATGTGTTCTAAGTGGGAAGCTCCATGTTTATTATCCAGAAGATGCAAGAAATGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATATCAGGAGAACAATTCTTTTCTGCGGATTCTCTCACAGATACCCAGAAGATTTATGTAGATTCGTTGGTGAAGAAAGCATACGAAAATTGGGAACAGGTTGTGGATTATGATGGCAAATCACTTGTTAATGGCAGCCAAAATAACAGTTCTATTGCATCTGAAAATGAACTTCGTGTTGAGTCAATCGATTATGGTAGTGGTTTAGATCATCAGCTGCAACTGCCGGGACTTCCAGTGCCTGTACCTTCTGAACAACAAATGAATTCTGGGATGTCAGTTGGGGGTTATAACGATAACATGGTAACACGATATCCAACCCAGTCATTGATTTCAAACTCCAGCTCCCGGAGTCAGTTCGATAGCTCATTATACATGTCTAATGACCAATTAATCACCAATACTCACCACACCCCAAACACTAGAAACGATCATGGGACAGTTGGGTTAGCTCTAGGACCTCCTCAATCATCGACGTCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCCATCTACTCTAAACCCTTTTGATGATTGGTCAAACAACAGGGACAAGGGGGTTGATGAATTCTTTTCAGAAGAAGAAATCCGCCTCAGAAGTCACGAAATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGGCTCTTCAGCATGGGAGGCCATGGGTCCATGAATGCGGAGGATGGCTATTCATTCCCAACATTTATGCCATCTCCCAATATACCAAACTATGATGAGGACCGTTCTCGCCCAGGCAGAGCTGTTGTGGGATGGTTGAAGATCAAGGCAGCAATGAGGTGGGGGTTCTTTATCAGGAAGATAGCAGCTGAGAAGCGGGCACAGATAGAGGAGTTAGATGAATAG 1908 0.4423 MQKPSTDAISMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARIGGRSPPKMIEGPEGRNLQLQFKSRLSLPLFTGGKVEGERGAPIHVVLIDANSGSVVTSGPESSVKLDVVVLEGDFNNEDDEDWTQDHFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESVRIREAKTVAFNVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKKLNNAGIVTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLHVYYPEDARNVGVIFNNIYELRGLISGEQFFSADSLTDTQKIYVDSLVKKAYENWEQVVDYDGKSLVNGSQNNSSIASENELRVESIDYGSGLDHQLQLPGLPVPVPSEQQMNSGMSVGGYNDNMVTRYPTQSLISNSSSRSQFDSSLYMSNDQLITNTHHTPNTRNDHGTVGLALGPPQSSTSGFHAGSSSIQPSTLNPFDDWSNNRDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHGSMNAEDGYSFPTFMPSPNIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05196 635 MobiDBLite consensus disorder prediction 499 526 - -
Viun3g05196 635 MobiDBLite consensus disorder prediction 483 526 - -
Viun3g05196 635 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Viun3g05196 635 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Viun3g05196 635 PANTHER OS02G0177800 PROTEIN 11 557 IPR012416 GO:0005516
Viun3g05196 635 MobiDBLite consensus disorder prediction 14 28 - -
Viun3g05196 635 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Viun3g05196 635 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05196 Viun-Chr3 58545067 58551606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05196 1 630 Calmodulin-binding Proteins AT5G57580 67.188 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05196 - - gmx:100790087 1130.93