LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun3g05194	ATGCAGAAACCATCTACCGACGCAATTAGTATGGGCAAAAGGAGCCTGGAGGGTGGAGAAGATGATCAGCCTGAACGAAAAAGGCCTGCTCTCGCAAGTGTAATTGTTGAAGCACTTAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAGCCTATTCTACGGAGAGTTGTGAGTGAAGAGGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGAATTGGTGGAAGGTCTCCACCTAAAATGATTGAAGGCCCTGAAGGTAGAAACTTGCAGCTGCAATTTAAGTCCCGGCTGTCTCTTCCCCTCTTCACAGGAGGAAAAGTAGAAGGCGAGCGGGGGGCTCCAATACATGTTGTTCTGATTGATGCCAACAGTGGAAGCGTTGTAACATCTGGACCTGAATCCTCTGTTAAGCTTGATGTTGTTGTCCTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACCCAAGATCATTTTGAAAGCCATGTGGTAAAAGAACGTGAAGGAAAGAGACCTTTATTAACTGGAGACTTGCAAGTGACACTCAAGGAAGGAGTTGGAACATTAGGGGAACTGACCTTTACTGATAATTCAAGCTGGATACGGAGCCGCAAATTCCGGCTTGGCCTGAAGGTTGCCTCAGGCTTTTGTGAGTCCGTACGCATTCGTGAAGCTAAGACAGTGGCTTTCAATGTTAAAGATCATAGAGGAGAATTATATAAGAAGCACTACCCTCCTGCATTGAATGATGAAGTGTGGAGATTGGAGAAGATAGGCAAGGATGGATCATTTCACAAGAAGCTGAATAATGCAGGAATCGTCACAGTTGAAGACTTTCTTCGGCTCGTGGTTAAAGATCAACAGAAATTGCGGAATATCCTTGGAAGTGGTATGTCAAACAAGATGTGGGAGGCTCTTTTAGAGCATGCAAAAACATGTGTTCTAAGTGGGAAGCTCCATGTTTATTATCCAGAAGATGCAAGAAATGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATATCAGGAGAACAATTCTTTTCTGCGGATTCTCTCACAGATACCCAGAAGATTTATGTAGATTCGTTGGTGAAGAAAGCATACGAAAATTGGGAACAGGTTGTGGATTATGATGGCAAATCACTTGTTAATGGCAGCCAAAATAACAGTTCTATTGCATCTGAAAATGAACTTCGTGTTGAGTCAATCGATTATGGTAGTGGTTTAGATCATCAGCTGCAACTGCCGGGACTTCCAGTGCCTGTACCTTCTGAACAACAAATGAATTCTGGGATGTCAGTTGGGGGTTATAACGATAACATGGTAACACGATATCCAACCCAGTCATTGATTTCAAACTCCAGCTCCCGGAGTCAGTTCGATAGCTCATTATACATGTCTAATGACCAATTAATCACCAATACTCACCACACCCCAAACACTAGAAACGATCATGGGACAGTTGGGTTAGCTCTAGGACCTCCTCAATCATCGACGTCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCCATCTACTCTAAACCCTTTTGATGATTGGTCAAACAACAGGGACAAGGGGGTTGATGAATTCTTTTCAGAAGAAGAAATCCGCCTCAGAAGTCACGAAATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGGCTCTTCAGCATGGGAGGCCATGGGTCCATGAATGCGGAGGATGGCTATTCATTCCCAACATTTATGCCATCTCCCAATATACCAAACTATGATGAGGACCGTTCTCGCCCAGGCAGAGCTGTTGTGGGATGGTTGAAGATCAAGGCAGCAATGAGGTGGGGGTTCTTTATCAGGAAGATAGCAGCTGAGAAGCGGGCACAGATAGAGGAGTTAGATGAATAG	1908	0.4423	MQKPSTDAISMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARIGGRSPPKMIEGPEGRNLQLQFKSRLSLPLFTGGKVEGERGAPIHVVLIDANSGSVVTSGPESSVKLDVVVLEGDFNNEDDEDWTQDHFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESVRIREAKTVAFNVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKKLNNAGIVTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLHVYYPEDARNVGVIFNNIYELRGLISGEQFFSADSLTDTQKIYVDSLVKKAYENWEQVVDYDGKSLVNGSQNNSSIASENELRVESIDYGSGLDHQLQLPGLPVPVPSEQQMNSGMSVGGYNDNMVTRYPTQSLISNSSSRSQFDSSLYMSNDQLITNTHHTPNTRNDHGTVGLALGPPQSSTSGFHAGSSSIQPSTLNPFDDWSNNRDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHGSMNAEDGYSFPTFMPSPNIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE	635

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun3g05194	635	MobiDBLite	consensus disorder prediction	499	526	-	-
	Viun3g05194	635	MobiDBLite	consensus disorder prediction	483	526	-	-
	Viun3g05194	635	Pfam	Calmodulin binding protein-like N-terminal domain	92	239	IPR046831	-
	Viun3g05194	635	Pfam	Calmodulin binding protein C-terminal domain	322	384	IPR046829	-
	Viun3g05194	635	PANTHER	OS02G0177800 PROTEIN	11	557	IPR012416	GO:0005516
	Viun3g05194	635	MobiDBLite	consensus disorder prediction	14	28	-	-
	Viun3g05194	635	Pfam	Calmodulin binding protein central domain	251	317	IPR046830	-
	Viun3g05194	635	MobiDBLite	consensus disorder prediction	1	28	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun3g05194	Viun-Chr3	58544926	58551606	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun3g05194	1	630	Calmodulin-binding Proteins	AT5G57580	67.188	0.0	853

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun3g05194	-		-	gmx:100790087	1130.93