Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05140 ATGCGAAATATCAACACCGTGAAGCAAGAATTCCTCAAAAAATGGATATGGGGTCTCAGAAAATATAGCTCTCAAAAGAAGAACATGAGTCTGTTGGAGAGAAAGAAGGCCATAAAGCTGTCAGCAGATTTGGCCATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAAGGCCCTCATAGCCAATGCTTCCAAAAGTAGCAGCAACAAAGTCCTCACGGAACACGTGCTGGGCTCATCACCACCACCACAGAGGGTAAGGAAAAGCTCAGCGAATTATTCGCACAGCACAAGGATGAGAAGCTGCAGAAGAAGAAAGCGCGCAGTCCACAGACCAAAGGATAGGGTGGTGGCGAGTTTCATTGCGAAAAAGCTGGTCCAGAAGCGAACGCGGAGGCTGAAGAGTCTCTTACCAGGAGGAGAATTCATGGACGATGTGTCTCTGGTGGAGGAAACCCTAGATTATGTAGAATCACTGCGAGCTCAAGTTGAAGTAATGAGATGCCTCGTCACTGCCTCAGAGCTCATGATCCTAAATCCATCGTAA 549 0.4791 MRNINTVKQEFLKKWIWGLRKYSSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKALIANASKSSSNKVLTEHVLGSSPPPQRVRKSSANYSHSTRMRSCRRRKRAVHRPKDRVVASFIAKKLVQKRTRRLKSLLPGGEFMDDVSLVEETLDYVESLRAQVEVMRCLVTASELMILNPS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05140 182 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 6 172 IPR044660 GO:0006355
Viun3g05140 182 MobiDBLite consensus disorder prediction 75 100 - -
Viun3g05140 182 CDD bHLH_AtIBH1_like 124 171 IPR044549 GO:0006355
Viun3g05140 182 MobiDBLite consensus disorder prediction 84 98 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05140 1 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 41.011 7.43e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05140 - - pvu:PHAVU_003G151300g 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05140 3 58012313 58013612 Viun3g05140 3 58012313 58013612 ECH