Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05135 ATGGGTAGTCTAGCGAGTCATCTTCCTCTAATTATTATGATAGGTCTGCAAGTTCATTATGCAGCACTTGCCATCTTCACCAGAGCAGCCCTGTTAGATGGGTTGAGTACGACAATCTTTGTAGTGTACCGGCAAGGCATAGCCACTTTGTCTTTGGCCCCTATGTTTTTCTCTTCTAAGAGGAGACAATCGGTAAAAAGTTGTTTGGGATTCAGGAGCGTCTTTTTGATGTTCGTCACCGCTCTTGTTGGAGTCACGGCAAACCAGAATGCGTATTTCAGAGGTTTATATTATTCATCTTCTACTGCAGCTACAGCAATGAGTAATCTGATACCTGCTTTAACGTTTGTAATTGCAGCAATTGCGGGATTTGAGAAACTTGAACTACGAAGCTTGAGAAGCATGGCGAAGGTATTAGGGACCATTTGTTGTGTTGGTGGAGCCTTAACCATGGCCTTGGTCAAAGGACATAAACTCTTACACACGGAGTTTCTTCCTTCTATACATCTCACTGGAAGTAGTGAAGGTGACGATTGGCTTCTCGGTTGTCTATTGCTTTTAGCAAGCAGTGTTTTCTGGTCTTGTTGGATGATTCTACAGGTACCAATCTCTTCGTCCTGCCCAGACCATTTATTATCAACCTTTTGGATGTGTCTCTTTTCAACTGTACAGTCAGCGCTATTTGCCCTACTCTCGGAGCCCGATCTTAAAGCATGGATTTTGAATTCACCTTTGCAGATTTCATGTTCTTTATACGCAGGAATCGGAATAGCGGTTAGCTTCTTCATTCAGTCCTGGTGCATCTCAGAAAGAGGTCCTCTATACTGTGCAATGTTCAACCCCTTAGCAACAGTGATCACTGCTTTCATAAGTGCAACATTCTTACAAGAAGAATTATACATCGGAAGTTTGGTCGGGGCTGTTGGAGTTATTGCTGGTTTGTATATTGTGCTTTGGGGTAAAGCTAAAGAGTTTTCTGAGATTAAACAAGCGGCACCACAACCAAACTTGCAAGATGATGAGATAAGTAGTAGGATAGATTTGGAACAACCCCTTCTATCAGATAAAGCTGAACATGTAACAGAGACGGATACCAAGGTGTAG 1104 0.4257 MGSLASHLPLIIMIGLQVHYAALAIFTRAALLDGLSTTIFVVYRQGIATLSLAPMFFSSKRRQSVKSCLGFRSVFLMFVTALVGVTANQNAYFRGLYYSSSTAATAMSNLIPALTFVIAAIAGFEKLELRSLRSMAKVLGTICCVGGALTMALVKGHKLLHTEFLPSIHLTGSSEGDDWLLGCLLLLASSVFWSCWMILQVPISSSCPDHLLSTFWMCLFSTVQSALFALLSEPDLKAWILNSPLQISCSLYAGIGIAVSFFIQSWCISERGPLYCAMFNPLATVITAFISATFLQEELYIGSLVGAVGVIAGLYIVLWGKAKEFSEIKQAAPQPNLQDDEISSRIDLEQPLLSDKAEHVTETDTKV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05135 367 PANTHER WAT1-RELATED PROTEIN 9 325 IPR030184 GO:0016020|GO:0022857
Viun3g05135 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 323 - -
Viun3g05135 367 MobiDBLite consensus disorder prediction 348 367 - -
Viun3g05135 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Viun3g05135 367 Pfam EamA-like transporter family 9 148 IPR000620 GO:0016020
Viun3g05135 367 Pfam EamA-like transporter family 181 318 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05135 Viun-Chr3 57941254 57943775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05135 4 362 Nodulin-like Gene Family AT4G28040 44.722 1.18e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05135 - - gmx:100816384 609.372