Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05084 ATGCCGACACGTTGTGAAATATGCTGCGAGATAATGATCGCGATCTTGCTTCCACCAATCGGAGTTTGCTTTCGCCACGGTTGTTGCAGCGTTGAATTCATCATCTGTTTGCTCCTCACAATTCTAGGTTATATTCCTGGCATCATTTATGCTCTCTATGCCATTATCTTCGTTGATCGTGACCAGTATTTTGATGAATACAGGCGTCCTCTCTATTCGCAATACTGA 228 0.4342 MPTRCEICCEIMIAILLPPIGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYSQY 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05084 75 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 59 IPR000612 GO:0016020
Viun3g05084 75 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05084 Viun-Chr3 57527316 57527930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05084 1 72 RCI2 Gene Family AT4G28088 77.778 9.26e-40 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05084 - - gmx:100306426 160.614