Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05057 ATGAGTGAGAAAGAGAAAGAGAAAGGGGTGGGCGAGGGACAATCGACGTTGCTGCACGGGAAGTACGAGCTGGGGAGGGTGTTGGGGCATGGAACGTTCGCGAAGGTGTACCACGCGCGGAACCTGAAGACGGGGGAGCACGTGGCAATGAAGGTGGTGGGGAAGGAGAAGGTGATAAAGGTGGGGATGATGGAGCAGGTGAAGAGGGAGATCTCGGTGATGAAAATGGTGAAGCACTCCAACATCGTGGAACTCCACGAAGTGTTGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTGCGCGGGGGAGAGCTCTTCAACAAGGTCTCCAAAGGTCGATTGAAGGAGGACGTCGCCAGACTCTACTTCCAGCAGTTAATCTCCGCGGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTCCTCCTGGACGAACACGGCAACCTCAAGGTCTCCGACTTCGGACTCACCGCCTTCTCCGACCACCTCAAGGAGGATGGGCTGCTGCACACCACGTGCGGCACGCCCGCCTACGTCTCGCCGGAGGTCATAGCGAAGAAAGGGTACGACGGTGCCAAGGCCGATATATGGTCGTGTGGGGTCATCCTCTACGTCCTCCTCGCAGGGTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGTACAAGAAAATTTACAGAGGGGACTTCAAGTGTCCACCTTGGTTTTCCGCGGAGGCGCGAAGGCTTGTTACCAGACTCCTCGACCCCAACCCGAATACCCGGATTAGTATCAGTAAAGTGATGGAGTCTTCCTGGTTTAAGAAACCGGTGCCGAGGAAGGTGGAGGAGGTGGCGAAGGTGGATTTGGAGGAGATGTGTGAGAGGCCTGCCACCATGAACGCGTTTCACATAATCTCGTTGTCGGAGGGGTTCGATTTGTCGCCCCTGTTTGAGGAGAAGAAGAGGGAGGAGATGAGATTCGCGACGGCGGGGACGCCCAGCAGCGTTATATCGCGGCTGGAGGAGGTGGCGAAGGCGGGGAAGTTCGACGTGAAAAGTAGCGAGACGAAAGTGAGGCTTCAGGGACAGGAGCGTGGGAGGAAGGGAAAGCTAGCGATTGCGGCGGATATTTACGCCGTGACGCCGTCGTTTATGGTGGTGGAAGTGAAGAAGGACAATGGAGATACCCTGGAGTACAACCAGTTCTGCAGCAAGCAGCTTCGTCCTGCGCTTAAAGACATCTTCTGGAATTCCCCACAGAATTCCACACCTGCAATAGTGCTTGAATGA 1299 0.5589 MSEKEKEKGVGEGQSTLLHGKYELGRVLGHGTFAKVYHARNLKTGEHVAMKVVGKEKVIKVGMMEQVKREISVMKMVKHSNIVELHEVLASKSKIYIAMELVRGGELFNKVSKGRLKEDVARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLTAFSDHLKEDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSAEARRLVTRLLDPNPNTRISISKVMESSWFKKPVPRKVEEVAKVDLEEMCERPATMNAFHIISLSEGFDLSPLFEEKKREEMRFATAGTPSSVISRLEEVAKAGKFDVKSSETKVRLQGQERGRKGKLAIAADIYAVTPSFMVVEVKKDNGDTLEYNQFCSKQLRPALKDIFWNSPQNSTPAIVLE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05057 432 FunFam Non-specific serine/threonine protein kinase 12 301 - -
Viun3g05057 432 SUPERFAMILY Protein kinase-like (PK-like) 19 289 IPR011009 -
Viun3g05057 432 ProSiteProfiles Protein kinase domain profile. 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05057 432 Gene3D Transferase(Phosphotransferase) domain 1 102 280 - -
Viun3g05057 432 ProSitePatterns Protein kinases ATP-binding region signature. 28 55 IPR017441 GO:0005524
Viun3g05057 432 Gene3D Phosphorylase Kinase; domain 1 14 101 - -
Viun3g05057 432 FunFam Non-specific serine/threonine protein kinase 297 419 - -
Viun3g05057 432 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Viun3g05057 432 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Viun3g05057 432 SMART serkin_6 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05057 432 CDD STKc_SnRK3 21 275 - -
Viun3g05057 432 Gene3D Kinase associated domain 1, KA1 296 420 - -
Viun3g05057 432 Pfam NAF domain 299 355 IPR004041 GO:0007165
Viun3g05057 432 CDD CIPK_C 303 415 - -
Viun3g05057 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Viun3g05057 432 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05057 432 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05057 Viun-Chr3 57306203 57308111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05057 4 428 CBL-interacting serine-threonine protein kinases AT4G30960 72.562 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun3g05057 Pkinase 2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05057 - K07198 var:108321114 846.269