Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04968 ATGGTGGCTTTTGCCATTTTGATATTCCTCTTCCTTGGTTCAGTGGAAGGATTCAGCACAAGCCCCCAGCCTTGCACATACGATAAAACTAAAACGTGTAAGCCAGCACTTGCCACGGCTATTTTCAGCACCGTATCTTTCCTGCTTGGTGGCGTCACATCACTTGTTTCTGGATTCCTTGGAATGAAAATTGCAACTTACGCCAATGCAAGAACCACCCTGGAGGCAAGAAAGGGCGTTGGGAAGGCCTTCATTACGGCTTTTAGATCTGGTGCTGTTATGGGTTTTCTCCTAGCTGCAAATGGTCTTCTGGTTCTTTACATTGCCATCAACTTGTTTAAGATCTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATAACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGGAGAGTTGGCGGAGGTATTTATACCAAAGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAGGTTGAGAGGAATATTCCCGAAGATGATCCCAGAAATCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGAGATATAGCTGGTATGGGATCTGATCTGTTTGGTTCATATGCGGAGTCATCTTGTGCTGCTCTTGTTGTTGCTTCCATCTCCTCATTTGGGTTGAATCATGAGTTCACTGCGATGCTCTACCCTCTCATTGTCAGTTCTGTGGGTATTCTTGTTTGTTTGCTCACCACCTTATTTGCAACTGACTTCTTTGAGATCAAGGCTGTGAAGGAGATTGAGCCTGCATTGAAAAAGCAGCTCGTTATTTCCACTGTGTTGATGACTATTGGGGTTGCAGTTGTTAGTTTTGTTGCACTTCCAACTTCCTTCACTATCTTCAATTTTGGAGTGCAGAAAGACGTCAAGAGCTGGCAGCTATTTTTGTGTGTTGCTGTTGGTCTTTGGGCAGGACTTATTATCGGATTTGTAACCGAGTACTATACTAGTAATGCATATAGTCCTGTTCAAGACGTAGCTGACTCCTGCAGAACTGGTGCTGCAACTAATGTTATATTTGGCCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCTATAGCAATTAGTATTTTTGTTAGTTTCACCTTTGCTGCCATGTATGGTATTGCCGTGGCTGCACTTGGGATGCTGAGTACCTTTGCCACTGGGTTGGCCATAGACGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGGAATGAGTGCCGAAGAATCTTTATCACCTTTAATTTGTGTATAA 1284 0.4393 MVAFAILIFLFLGSVEGFSTSPQPCTYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHEFTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTFATGLAIDAYGPISDNAGGIGMSAEESLSPLICV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04968 427 NCBIfam V-type H(+)-translocating pyrophosphatase 1 417 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun3g04968 427 Pfam Inorganic H+ pyrophosphatase 4 414 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Viun3g04968 427 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 417 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04968 Viun-Chr3 56658301 56660014 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04968 1 418 Primary Pumps ATPases AT1G15690 87.441 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04968 K23025 - gmx:100775864 765.763