Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04819 ATGAATGCTCCTACCACCGTAACCGCCATCAACACCACACCGCCGAGTAGGGATGAACCCGACTACGACAGCAGCTCCTCCTCCATCACCGTGCCGGAATCCAGCCGGAGCTGGATGACCAACCTCAGCTTCGGCAGCCGGCGCCGCCGGAGCTCGGTCTCCGTGTGCTCCTCCACCCTGGAGAGTCCGCACGCGAGGCCCCACAAGGCGAACCAGGCTGCATGGGAGGTCATGCGGCGGCTCCGGCGGGACAAGGGGCAGGTGGGTCTGGAGCACTTCCGCCTGATGCGGCGGCTGGGGAGCGGCGACATCGGGAACGTGTACCTTTGCCAGATAAGGAACCCCGTGGTGGGGTTGCCGCAGTGCTTTTATGCGATGAAGGTGGTGGACAGAGAGGCACTTGCCATAAGGAAGAAGCTGCAGAGGGCGGAGATGGAGAAGGAGATTCTCGCCATGCTTGATCACCCCTTCTTGCCTACTTTGTACACTGAGTTTGACGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGCCCCGGTGGCGACTTGTACGCTGCACGCCAACGCCAGCCCGGGAAGCGCTTTTCCATAACATCCACTAAGTTTTATGCGGCTGAGACGCTATTGGCATTAGAGTATCTTCACATGATGGGCATAGTGTACAGAGATTTGAAGCCAGAGAACGTGCTTGTGAGAGAGGATGGACACATTATGCTTTCAGATTTTGATCTTTCACTGAAATGTGACGTTGTTCCGAAGCTGTTAAGGAGTAAGACGAGAGTGGAACGCAGTATCAAGAGTACAAAGAGATCTGTGCCAGCCTGCACTGCCCCCATGCAGCCTGTGCTGTCATGTTTGTTGGCATCAAGCAAGAAAAAGAAAGCGACAGTGACAACAGTTATAAGAGAAAATGTTGAGGTGGAAGAGCTTGATCCGGAGCTGGTGGCTGAGCCTATTGATGCCAAGTCGAAGTCATTTGTGGGGACACACGAGTACTTGGCACCAGAAGTGATCTTGGGGCAAGGACATGGGAGTGCCGTGGACTGGTGGACGTTTGGGGTGTTCTTGTACGAGATGTTATACGGGAGAACACCCTTCAAAGGTGAAAATAATGAGAAAACCCTCGTCAACATTTTGAAGCAACCATTGGCTTTTCCCAGAATCGCTGTTAGCAGCAGCAAGGATTATGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGCTCTTGGTGAAGAATCCAAATAAGAGAATTGGAAGCTGTACGGGTTCTGTTGAGATCAAAAGGCATGAGTTCTTCAAGGGTGTAAATTGGGCCTTAATTAGATCCGTTAGGCCACCTGAAGTCCCCAGTGATATGAACAAAATTAGGAGTAGTAGGGTTTTGCTACCAAAACTAAGCAAAACAGAAAGGGATCAACCATATCAGCTTAGAACTCATCATTTTGAATACTTCTAA 1458 0.511 MNAPTTVTAINTTPPSRDEPDYDSSSSSITVPESSRSWMTNLSFGSRRRRSSVSVCSSTLESPHARPHKANQAAWEVMRRLRRDKGQVGLEHFRLMRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSITSTKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRVERSIKSTKRSVPACTAPMQPVLSCLLASSKKKKATVTTVIRENVEVEELDPELVAEPIDAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLAFPRIAVSSSKDYEEMVKVQDLISKLLVKNPNKRIGSCTGSVEIKRHEFFKGVNWALIRSVRPPEVPSDMNKIRSSRVLLPKLSKTERDQPYQLRTHHFEYF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04819 485 ProSiteProfiles Protein kinase domain profile. 93 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04819 485 Gene3D Transferase(Phosphotransferase) domain 1 320 451 - -
Viun3g04819 485 FunFam protein kinase PINOID 178 246 - -
Viun3g04819 485 CDD STKc_phototropin_like 92 450 - -
Viun3g04819 485 Gene3D Phosphorylase Kinase; domain 1 91 177 - -
Viun3g04819 485 Gene3D Transferase(Phosphotransferase) domain 1 178 247 - -
Viun3g04819 485 SMART serkin_6 93 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04819 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Viun3g04819 485 PANTHER FLIPPASE KINASE 1-RELATED 41 454 - -
Viun3g04819 485 Pfam Protein kinase domain 94 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04819 485 Pfam Protein kinase domain 322 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04819 485 FunFam protein kinase PINOID 2 91 177 - -
Viun3g04819 485 FunFam serine/threonine-protein kinase D6PK-like 321 451 - -
Viun3g04819 485 SUPERFAMILY Protein kinase-like (PK-like) 75 455 IPR011009 -
Viun3g04819 485 MobiDBLite consensus disorder prediction 1 32 - -
Viun3g04819 485 Coils Coil 126 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04819 Viun-Chr3 55466130 55468212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04819 18 485 AGC Kinase Gene Family AT2G26700 58.667 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun3g04819 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04819 K08286 - gmx:100777988 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04819 3 55466130 55468212 Viun3g04819 3 55466130 55468212 ECH