Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04801 ATGGACGCCCTCTTCTCCTCCCTCTCCTTCATCTTCCTTCTCTTCCTCCTCAAGCTCACCGTCCTCCTATGGTGGCGACCCAGAAAAATTCAAGGCCACTTCTCCAAGCAAGGAATCCGAGGACCCCCTTATCGTTTCTTCATTGGCAACGTTAAGGAACTTGTCGCCATGATGTTGAAGGCCTCCTCCAAACCCATGCCTTTCTCCCACAACATTCTCCCCAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATCTATGGTGCAACATTCCTAGTTTGGTTCGGACCCACCGTTCGTCTCACCGTCTCTGATCCAGACCTCATCCGGGAAATCTTCACATCCAAGTCAGAATTTTACGAGAAAAACGAAGCTCCACCCCTGGTGAAGCAGCTGGAAGGCGATGGCCTCCTCAGCCTCAAAGGAGAAAAGTGGGCTCACCATCGAAGGATTATCTCTCCCACTTTTCACATGGAGAATCTAAAATTGCTGATACCGGTGATGGCAACAAGCGTGGTCGAGATGTTGGAAAAGTGGTCGGCAATGGGTGAGAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAGAGGCTGACAGAAGACGTGATCACGAGGACGGCATTCGGAAGCAGCTACGAAGACGGGAAAGCCATATTCCGGTTACAGGGCCAGCAGATGGACTTGGCCGCCGACGCCTTCCAGAAAGTATTCATTCCGGGTTACAGATTTGTGCCCACAAGGAGGAACATAAAGTCGTGGAAGTTGGAGAAGGAGATAAAGAAATCGCTGGTGAAGCTGATAGAGCGACGGAGGGAGAATTCGGAGAAGGTGGTGGAGAAGGGGGCGAAGGATTTGTTGGGGCTGATGATCGAGGCGTCGAACAGGAATTCGACGAATGTGACAGTGGATGACATTGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGGAAACAGACCACATCGAACCTGCTGACGTGGACGACCATTCTCCTAGCTATGCATCCACAGTGGCAGGTACGGGCACGTGAGGAGGTTCTGAAGATGTGTGGATCACGTGAGCTTCCGACCAAAGACCATGTCGCAAAGCTGAGGACGGTGAGCATGATCGTGAACGAGTCGCTGAGGCTGTACCCGCCGACGATCGCCACAATAAGACGTGCGAAGACGGACGTGGAGTTGGGGGGGTACAAGATACCACGAGGGACGGAGCTGCTGGTTCCAATCCTGGCCGTTCATCACGATCAGGCCATATGGGGAAACGACGCGAACGAGTTCAATCCTGGGCGTTTCAGCCAGGGGGTGGCCCGCGCCGCGAACCATCCTCTGGCCTTCATACCCTTTGGGGTTGGTGTTCGCACATGCATCGGACAAAACCTGGCAGTGCTACAAACCAAACTGGCCCTCGCAATCATACTCCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTCATGCTACTCTACCCTCAGTACGGCGCACCAATCATTTTCCAACGCCTCTCCACTCCTCCTACTACTCTTCCCGACGCAACTGTATAG 1560 0.5288 MDALFSSLSFIFLLFLLKLTVLLWWRPRKIQGHFSKQGIRGPPYRFFIGNVKELVAMMLKASSKPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLEKWSAMGEKGEVEIEVSEWFQRLTEDVITRTAFGSSYEDGKAIFRLQGQQMDLAADAFQKVFIPGYRFVPTRRNIKSWKLEKEIKKSLVKLIERRRENSEKVVEKGAKDLLGLMIEASNRNSTNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPQWQVRAREEVLKMCGSRELPTKDHVAKLRTVSMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLVPILAVHHDQAIWGNDANEFNPGRFSQGVARAANHPLAFIPFGVGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQRLSTPPTTLPDATV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04801 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Viun3g04801 519 Pfam Cytochrome P450 77 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 FunFam Cytochrome P450 734A1 24 508 - -
Viun3g04801 519 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 SUPERFAMILY Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 CDD CYP734 77 501 - -
Viun3g04801 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 500 - -
Viun3g04801 519 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04801 519 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04801 Viun-Chr3 55382083 55385305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04801 8 509 Cytochrome P450 AT2G26710 77.756 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04801 K15639 - gmx:100780027 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04801 3 55382083 55385305 Viun3g04801 3 55382083 55385305 ECH