Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04783 ATGGCGCTGCTCACAATTATCGTAGTCTTCCTCCTCCAACTGAGTTCTCATGTCAGAGTCAACTCGGAGCCGACTCAGGACAAGCAAGCGCTCCTTGCTTTCCTCTCCCAAACCCGGCACTCCAACCGCCTCCAATGGAACGCTTCCGCTTCCGCATGCGACTGGGTGGGCGTCAAATGCGACGACTCCCGCTCCTTCGTCTACTCTCTCCGTTTACCCGCCGTCGACCTCGTGGGTCCGGTTCCACCCGCCACAATCGGCCGCCTCTCCCAGCTTCGGATCCTCAGTCTCCGCTCCAACGGTCTCACCGGCGAGATCCCTGCCGATTTCTCGAACCTCACCTTCCTCCGCAACCTCTACCTCCAGAAAAACCAGTTTTCCGGTGAGTTCCCCCCGAGTCTCACTCGCCTCACTCGTCTCACCCGCTTGGATCTCTCCTCCAACAACTTCACCGGTCAAATCCCTTTCTCTGTCAACAACTTAACCCACCTCACCGGCCTCTTCTTGGAGCACAACAGCTTCTCTGGGAAAATCCCCAGCATCACTGCCAAGCTCGTTAGCTTCAACGTTTCCTTCAACCGCCTCAACGGTTCCATTCCGGAGACGCTCTCCACTTTCCCCGACTCCTCATTCGCGGGAAACGCAGATCTCTGTGGCCCGCCGTTGAAGGCCTGCAACCCCTTCTTCCCGGCTCCGGCGCCGTCTCCCTCCTCCAATTCGACCCCGGCCACGGCGCATAAGAAGTCCAAGAAGCTCTCCACGGGCGCCATTGTCGCAATCGTTGTCGGGTCCGTTCTCGTGGCGGCGTTGCTGCTGCTGCTGTTGCTGCTGTGCGTCCGGCGCCGGCGACGGCAGCCAGCGAAACCGCCGAAGCCTGTTGCGGCGGCACGTGCCGTGCCGGTGGAGGCGGGGACGTCGTCGTCGAAGGAGGATATCACCGGGGGTTCGGCGGAGGCGGAGAGGAACAAGCTGGTGTTCTTTGAAGGGGGGATTTACAGTTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTGTTGGGGAAGGGCAGCGTGGGGACTTCGTACAAGGCAGTGCTTGAGGAAGGGACGACGGTGGTGGTGAAGAGGCTGAAGGATGTTGTGGTGACGAAGAAAGAGTTCGAGATGCAAATGGAAGTTCTGGGGAAGATTAAGCACGATAATGTGGTACCCCTCAGAGCCTTTTACTTCTCCAAGGACGAGAAATTGCTCGTTTACGATTACATGTCTGCCGGAAGCTTGTCTGCTCTCCTTCACGGGAGCAGAGGGTCTGGGAGAACACCACTGGACTGGGACAGCAGAATGAAAATAGCAGTAGGAGCGGCACGGGGGTTGGCATGCCTCCACGTGGCAGGCAAGGTGGTCCACGGCAACATAAAATCCTCCAACATCCTCCTCCGAGGGCCGGACCACGATGCCGGCGTTTCGGACTTTGGTCTAACCCCCCTGTTCGGGAACGGAGCTCCGTCGAACCGAGTGGCGGGTTACCGGGCACCCGAGGTGGTGGAAACCCGAAAGGTGAGCTTCAAGTCTGACGTGTACAGCTTTGGCGTGTTGCTGTTGGAGCTTCTAACGGGGAAAGCCCCGAACCAAGCGTCGCTTGGGGAAGAGGGCATAGACCTCCCGAGGTGGGTCCAGTCGGTGGTGCGCGAAGAGTGGACCGCGGAGGTCTTCGACGCGGAGCTCATGAGGTATCACAACATCGAGGAGGAGATGGTTCAACTCTTGCAAATAGCCATGGCGTGTGTTGCGGTGGTGCCTGACCAGAGGCCCAGCATGCAGGACGTGGTGCGCATGATCGAGGACATCAACCGGGGGGAGACCGACGACGGCCTGCGTCAGTCCTCCGATGACCCTTCTAAAGGATCCGAGGGTCACACCCCTCCCCCGGAGTCAAGGACACCCAGGTCACTCACACCTTAA 1944 0.5916 MALLTIIVVFLLQLSSHVRVNSEPTQDKQALLAFLSQTRHSNRLQWNASASACDWVGVKCDDSRSFVYSLRLPAVDLVGPVPPATIGRLSQLRILSLRSNGLTGEIPADFSNLTFLRNLYLQKNQFSGEFPPSLTRLTRLTRLDLSSNNFTGQIPFSVNNLTHLTGLFLEHNSFSGKIPSITAKLVSFNVSFNRLNGSIPETLSTFPDSSFAGNADLCGPPLKACNPFFPAPAPSPSSNSTPATAHKKSKKLSTGAIVAIVVGSVLVAALLLLLLLLCVRRRRRQPAKPPKPVAAARAVPVEAGTSSSKEDITGGSAEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEVLGKIKHDNVVPLRAFYFSKDEKLLVYDYMSAGSLSALLHGSRGSGRTPLDWDSRMKIAVGAARGLACLHVAGKVVHGNIKSSNILLRGPDHDAGVSDFGLTPLFGNGAPSNRVAGYRAPEVVETRKVSFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVAVVPDQRPSMQDVVRMIEDINRGETDDGLRQSSDDPSKGSEGHTPPPESRTPRSLTP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04783 647 FunFam pollen receptor-like kinase 1 310 415 - -
Viun3g04783 647 PANTHER OS05G0588300 PROTEIN 6 623 - -
Viun3g04783 647 CDD STKc_IRAK 347 610 - -
Viun3g04783 647 MobiDBLite consensus disorder prediction 609 627 - -
Viun3g04783 647 Gene3D Ribonuclease Inhibitor 24 184 IPR032675 -
Viun3g04783 647 MobiDBLite consensus disorder prediction 609 647 - -
Viun3g04783 647 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Viun3g04783 647 SUPERFAMILY Protein kinase-like (PK-like) 345 610 IPR011009 -
Viun3g04783 647 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 416 621 - -
Viun3g04783 647 Gene3D Transferase(Phosphotransferase) domain 1 416 628 - -
Viun3g04783 647 Gene3D Ribonuclease Inhibitor 185 225 IPR032675 -
Viun3g04783 647 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Viun3g04783 647 Pfam Leucine Rich Repeat 91 113 IPR001611 GO:0005515
Viun3g04783 647 SUPERFAMILY L domain-like 27 206 - -
Viun3g04783 647 MobiDBLite consensus disorder prediction 288 314 - -
Viun3g04783 647 ProSiteProfiles Protein kinase domain profile. 341 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04783 647 Pfam Protein kinase domain 344 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g04783 647 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04783 Viun-Chr3 55148471 55152044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04783 3 628 Receptor kinase-like Gene Family AT5G58300 53.302 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun3g04783 Pkinase 9.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04783 - - gmx:100806857 1031.55