Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04742 ATGGGTAAAAGTACAAAGCAGTCTTCACAAAAGAAAACTGGTCCTTCTTCTCCGGTGGCTGCTGATAAAAACCCAGGAGATCGTCCATTGGATAAAGACAGGAAAAAGGATGCTCCTCATCCACGAAAGCAAGTTGATGATGAAACCCGAATGGAAAAGGCTAGAAGACGTGCAGTAGGCAATCCAACTGAATCTAGAACCAGAGTTGAATTATTTCAGCATTTGCCTCAATATGAACATAGGACTAAGCTTTCTAATCTTGAATCAAAGTTTTTCCACCTTGGTTTAGTGCACCCTTCTGTATTTGAGGCAGGACTTCGTTATTCGACAGGAGAAATATCAGGGGGTAATGCTCGTTGTATAGCAATGCTGAGAGCCCTTCAAGATGCCATTAGAGATTACTGCACAGATCATGAAAAGGCCCTTGTTAGGGATTTAACTGCAAAAATCAACAGTTATGTTTCATTCTTTGCTGAATGCAGACCACTTTCAATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTCAAGCTGTCTTTAAATTATTCTGAGTTTGAGGCAAAAACAACCCTGTGTTCAGATATTGACCGGTTTATAAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTGCGACATGCTTTTACAAAGATTAAGGATGGGGATGTGCTTCTCACATATGGATTGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTGGGTAAAAAGTTTCGTGTTGTCGTGGTAGATTCCCAGCCAAGGTTAGAAGGTCAGGCCTTGCTTCGTAGGCTAGTGGCCAAGGGTCTGAGATGCACATATACTCATATAAATGCTGTTTCTTATATCATGCATGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGAACTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGATCCAGATGCTATTGCCAGGGTTCCTGGACGAATGGATGTCAATTATCTGGATAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTGTCGGTTATTGTAACAGATTATGGCATGCTTCCTCCTACAAGCGTGCCTGTAATAGTACGTGAATATCGAGAGCATTTACTGATGTAG 1266 0.4052 MGKSTKQSSQKKTGPSSPVAADKNPGDRPLDKDRKKDAPHPRKQVDDETRMEKARRRAVGNPTESRTRVELFQHLPQYEHRTKLSNLESKFFHLGLVHPSVFEAGLRYSTGEISGGNARCIAMLRALQDAIRDYCTDHEKALVRDLTAKINSYVSFFAECRPLSMSMGNAIRFVKSRIVKLSLNYSEFEAKTTLCSDIDRFINEKIILADKVIVRHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKKFRVVVVDSQPRLEGQALLRRLVAKGLRCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHELRVPVLICCEAYKFHERVLLDSICSNELGDPDAIARVPGRMDVNYLDNWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYREHLLM 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04742 421 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 5 418 - -
Viun3g04742 421 MobiDBLite consensus disorder prediction 1 17 - -
Viun3g04742 421 Pfam Initiation factor 2 subunit family 113 405 IPR000649 GO:0044237
Viun3g04742 421 Gene3D - 209 415 IPR042529 -
Viun3g04742 421 MobiDBLite consensus disorder prediction 25 63 - -
Viun3g04742 421 MobiDBLite consensus disorder prediction 1 67 - -
Viun3g04742 421 SUPERFAMILY NagB/RpiA/CoA transferase-like 96 415 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04742 Viun-Chr3 54818191 54822302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04742 2 421 Eukaryotic Initiation Factors Gene Family AT5G38640 69.359 0.0 614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04742 3 54818191 54822302 Viun3g04742 3 54818191 54822302 ECH