Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04741 ATGGATTCAACTCGTGTCTCTCATAGTCTTGGGGATCCCAAAATTCGTCAAGTTGGTTTCTTTGTTCCTGAATCCTCCACTACCGATTCCCACAAGATTCTGTCGCCAAGTCATCTTTCTGTTCCGGAGATGCAGAATTCTTCCGTCCATGGCCAAGTGACATCTCGGAGCTACGATTATTCGGAGAATCGAAACCTTGAAACTGACATTGAAAAGAAGGGAGAGGAAGAGAAAGAGGCTATAAAATCAAGGTCAAAGCCACTGAAAGAAAAAACTACCAAAGCGGAGAGACGAGCCTTGCAAGAAGCACAGAGAGCTGCTAAAGCTGAGGGAAGTAAGGCTGTTGCTGGAACTGGTAGGGCTGCCATGGGTAAAAGTACAAAGCAGTCTTCACAAAAGAAAACTGGTCCTTCTTCTCCGGTGGCTGCTGATAAAAACCCAGGAGATCGTCCATTGGATAAAGACAGGAAAAAGGATGCTCCTCATCCACGAAAGCAAGTTGATGATGAAACCCGAATGGAAAAGGCTAGAAGACGTGCAGTAGGCAATCCAACTGAATCTAGAACCAGAGTTGAATTATTTCAGCATTTGCCTCAATATGAACATAGGACTAAGCTTTCTAATCTTGAATCAAAGTTTTTCCACCTTGGTTTAGTGCACCCTTCTGTATTTGAGGCAGGACTTCGTTATTCGACAGGAGAAATATCAGGGGGTAATGCTCGTTGTATAGCAATGCTGAGAGCCCTTCAAGATGCCATTAGAGATTACTGCACAGATCATGAAAAGGCCCTTGTTAGGGATTTAACTGCAAAAATCAACAGTTATGTTTCATTCTTTGCTGAATGCAGACCACTTTCAATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTCAAGCTGTCTTTAAATTATTCTGAGTTTGAGGCAAAAACAACCCTGTGTTCAGATATTGACCGGTTTATAAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTGCGACATGCTTTTACAAAGATTAAGGATGGGGATGTGCTTCTCACATATGGATTGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTGGGTAAAAAGTTTCGTGTTGTCGTGGTAGATTCCCAGCCAAGGTTAGAAGGTCAGGCCTTGCTTCGTAGGCTAGTGGCCAAGGGTCTGAGATGCACATATACTCATATAAATGCTGTTTCTTATATCATGCATGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGAACTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGATCCAGATGCTATTGCCAGGGTTCCTGGACGAATGGATGTCAATTATCTGGATAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTGTCGGTTATTGTAACAGATTATGGCATGCTTCCTCCTACAAGCGTGCCTGTAATAGTACGTGAATATCGAGAGCATTTACTGATGTAG 1632 0.4185 MDSTRVSHSLGDPKIRQVGFFVPESSTTDSHKILSPSHLSVPEMQNSSVHGQVTSRSYDYSENRNLETDIEKKGEEEKEAIKSRSKPLKEKTTKAERRALQEAQRAAKAEGSKAVAGTGRAAMGKSTKQSSQKKTGPSSPVAADKNPGDRPLDKDRKKDAPHPRKQVDDETRMEKARRRAVGNPTESRTRVELFQHLPQYEHRTKLSNLESKFFHLGLVHPSVFEAGLRYSTGEISGGNARCIAMLRALQDAIRDYCTDHEKALVRDLTAKINSYVSFFAECRPLSMSMGNAIRFVKSRIVKLSLNYSEFEAKTTLCSDIDRFINEKIILADKVIVRHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKKFRVVVVDSQPRLEGQALLRRLVAKGLRCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHELRVPVLICCEAYKFHERVLLDSICSNELGDPDAIARVPGRMDVNYLDNWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYREHLLM 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04741 543 MobiDBLite consensus disorder prediction 147 185 - -
Viun3g04741 543 MobiDBLite consensus disorder prediction 22 61 - -
Viun3g04741 543 SUPERFAMILY NagB/RpiA/CoA transferase-like 218 537 IPR037171 -
Viun3g04741 543 Gene3D - 331 537 IPR042529 -
Viun3g04741 543 Pfam Initiation factor 2 subunit family 235 527 IPR000649 GO:0044237
Viun3g04741 543 MobiDBLite consensus disorder prediction 62 104 - -
Viun3g04741 543 MobiDBLite consensus disorder prediction 22 187 - -
Viun3g04741 543 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 53 540 - -
Viun3g04741 543 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04741 Viun-Chr3 54818191 54822452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04741 79 543 Eukaryotic Initiation Factors Gene Family AT5G38640 66.807 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04741 K03680 - gmx:100795256 833.558