Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04727 ATGGCTGTTCCCTTCAAAGCCTCATACCCACTTTTCCTTTGCTTCATTCTTTTCTGTGGCGTCAATTGCACTGAGTTTGAAGTTGGAGGCCATGAAGGTTGGGTTGTCCCAAAGACAAAGGATAATGCTCAAATGTTCAATCAGTGGGCAGCCCAAAACAGATTCAAGATTGATGACACTCTTCTTTTCAAGTACGAGAAAGACTCGGTTATGGAGGTGACTGAAGAAGAATATGAAAAATGTGTATCCACTCGTCCCCTCTTTTTCTCCAACAATGGTAACACTGTGTTCAAGGTTGACAGACCAGGGTTGTTCTTCTTCATCAGTGGTGTTCGTGGTCACTGTGAGAGAGGGCAGAAGATGATCATCAAGGTCTTGGATATTGAGGCAACACCCTCACCCCAATATGAAAATGGCACTGCACCAAAGCCACATTCAAAAAGTGGAGTTGCTGAACTTACTCCTATGAGGATCATGACAGCGTCCACAGTTTTTGTTATGGCAACATTCTTCCTTCAGCTTTATGTTTGA 531 0.435 MAVPFKASYPLFLCFILFCGVNCTEFEVGGHEGWVVPKTKDNAQMFNQWAAQNRFKIDDTLLFKYEKDSVMEVTEEEYEKCVSTRPLFFSNNGNTVFKVDRPGLFFFISGVRGHCERGQKMIIKVLDIEATPSPQYENGTAPKPHSKSGVAELTPMRIMTASTVFVMATFFLQLYV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04727 176 Gene3D - 23 130 IPR008972 -
Viun3g04727 176 ProSiteProfiles Phytocyanin domain profile. 24 127 IPR003245 GO:0009055
Viun3g04727 176 PANTHER BLUE COPPER PROTEIN 24 144 IPR039391 GO:0009055
Viun3g04727 176 Pfam Plastocyanin-like domain 44 119 IPR003245 GO:0009055
Viun3g04727 176 FunFam Early nodulin-like protein 1 23 130 - -
Viun3g04727 176 SUPERFAMILY Cupredoxins 23 126 IPR008972 -
Viun3g04727 176 CDD OsENODL1_like 24 126 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04727 Viun-Chr3 54637801 54638781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04727 10 129 Phytocyanin Superfamily AT1G48940 60.000 3.10e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04727 - - var:108327897 327.02