Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04702 ATGGAATGCAATGAAGATGATGAACTCCCTGTAGCCCCTTATGCTTCCTTAACACAGTGCTTTCACTATCCTTCTCCAACCCAGAGACCTATCCTGACCTCAACAATGGAAACTGGTGAAGGCCATAATTTGACCCATCTGGACCAACCTCATAGTTTACACCACATTCCATTTTTCTGCTCTCAATTGCACCTTCCAAGCAACAGCCACGACCCAATTCAAATCCCACTCCATAAACCCTCTCCCAACACATCATCAAACAGTAACAACAATAACAACTCCGATGAAGCAAAGGCTCTCCTTGATGACAGAAAGAAGAAAAGAATGTTCTCCAACAGAGAATCTGCTCGCAGGTCTCGCATGCGAAAGAAGCAACAAATTGAAGTCCTGCAGTATCACGTGGATCATCTGCAGACACTAAACCATCAACTGTCCCAAAAGATCATTTACTTGCTTGAATGTAACCAACAAATCCATCAACAGAATGCTCAGCTAAAAGAAAAAGTTTCCTCTCTTCAGGTAGCACTCTCTGACTTGTTGGTTCCTGCAGGAGGTGCCGAGCAACCTCACCACATCTCTAACGGCTTCCTAGCCGAGCCTTCTTCAACTAGACCAATTGCAAGTTCTCGAGCATAG 636 0.4465 MECNEDDELPVAPYASLTQCFHYPSPTQRPILTSTMETGEGHNLTHLDQPHSLHHIPFFCSQLHLPSNSHDPIQIPLHKPSPNTSSNSNNNNNSDEAKALLDDRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNHQLSQKIIYLLECNQQIHQQNAQLKEKVSSLQVALSDLLVPAGGAEQPHHISNGFLAEPSSTRPIASSRA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04702 211 CDD bZIP_plant_GBF1 105 153 IPR045314 GO:0003700|GO:0006355
Viun3g04702 211 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Viun3g04702 211 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 35 187 IPR044521 -
Viun3g04702 211 SUPERFAMILY Leucine zipper domain 104 155 IPR046347 GO:0003700|GO:0006355
Viun3g04702 211 MobiDBLite consensus disorder prediction 191 211 - -
Viun3g04702 211 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Viun3g04702 211 FunFam BZIP transcription factor 102 153 - -
Viun3g04702 211 Coils Coil 155 175 - -
Viun3g04702 211 MobiDBLite consensus disorder prediction 78 96 - -
Viun3g04702 211 MobiDBLite consensus disorder prediction 97 122 - -
Viun3g04702 211 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Viun3g04702 211 Pfam bZIP transcription factor 103 162 IPR004827 GO:0003700|GO:0006355
Viun3g04702 211 MobiDBLite consensus disorder prediction 195 211 - -
Viun3g04702 211 MobiDBLite consensus disorder prediction 70 122 - -
Viun3g04702 211 Gene3D - 103 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04702 Viun-Chr3 54382217 54385132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04702 102 208 bZIP Transcription Factor Family AT5G60830 53.704 5.61e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun3g04702 bZIP_1 9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04702 - - gmx:102664001 337.035