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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Viun3g04686
ATGGGAAGGGGAAGAGTGGAGTTGAAGAGGATCGAAAACAAGATCAACAGACAAGTCACCTTCTCAAAGAGACGCTCTGGTTTGATCAAGAAAGCCCGCGAGATCTCTGTGCTTTGCGATGCTGATGTGGCTCTCATAGTCTTCTCTACTAAAGGCAAACTTTTGGAATACTCCAACCAACCTTCTGTGGAAAGAATTATTGATCGGTATGAGAGGCATTCATATGCGGAGAGGCAAGAAGGTGGAAGTGATCAAGCACCAAATGAAAACTGGGCCATAGAACACGAAAAACTGAAGGCTAGGGTGGAAGTACTACAGCTACATCAAAGGAATTTCATGGGAGAAGACCTTGATAGCTTAAATCTTAGAGGACTTCAGAGTTTAGAACAACAACTTGATTCCGCCCTCAGACACATTAGATTACGAAAGAACCAAGCCATGCATGAATCTATTTCAGGTCTTCAGAAAAAGGACAAGGCACTTCGGGAACGTAACAACGTGCTCGCCAAGAAGATAAAAGAAAAAGAGAAGGCACTGGTCCCTCAAGAACAGGAAGCGTTGCTAAATAACGGGGATGTGACTTCTGTCATGGTAACTAAGCCATTGGAGTCCCTGAATATTGGAGGGTCCCCAGAAGCGAAATATGATGAAGGAACTCCAACATCAACTCAACCTAAAACCGTAATTCCTCCATGGATGATGACTCTTCCAACAGATGAATAG
723
0.4385
MGRGRVELKRIENKINRQVTFSKRRSGLIKKAREISVLCDADVALIVFSTKGKLLEYSNQPSVERIIDRYERHSYAERQEGGSDQAPNENWAIEHEKLKARVEVLQLHQRNFMGEDLDSLNLRGLQSLEQQLDSALRHIRLRKNQAMHESISGLQKKDKALRERNNVLAKKIKEKEKALVPQEQEALLNNGDVTSVMVTKPLESLNIGGSPEAKYDEGTPTSTQPKTVIPPWMMTLPTDE
240
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Viun3g04686
240
Coils
Coil
125
145
-
-
Viun3g04686
240
CDD
MADS_MEF2_like
2
79
IPR033896
GO:0000977|GO:0045944
Viun3g04686
240
FunFam
MADS-box transcription factor MADS-MC
13
86
-
-
Viun3g04686
240
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
10
57
IPR002100
GO:0003677|GO:0046983
Viun3g04686
240
Pfam
K-box region
85
172
IPR002487
GO:0003700|GO:0005634|GO:0006355
Viun3g04686
240
ProSiteProfiles
K-box domain profile.
88
178
IPR002487
GO:0003700|GO:0005634|GO:0006355
Viun3g04686
240
MobiDBLite
consensus disorder prediction
204
230
-
-
Viun3g04686
240
ProSitePatterns
MADS-box domain signature.
3
57
IPR002100
GO:0003677|GO:0046983
Viun3g04686
240
SUPERFAMILY
SRF-like
2
91
IPR036879
GO:0003677|GO:0046983
Viun3g04686
240
PRINTS
MADS domain signature
23
38
IPR002100
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Viun3g04686
Viun-Chr3
54269157
54274979
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Viun3g04686
1
209
MADS-box Gene Family
AT1G26310
52.679
4.95e-77
231
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-MIKC
Viun3g04686
K-box
3.2e-26
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Viun3g04686
K09264
K09260
gmx:100798351
375.17
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