Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04682 ATGTCATCTGAACTCTGCTCTCTCTTTCTTCCGCTATCCGCATGTTCAGCCATGCTCACTTTTGATGTTTTCATCGGTGTTATGTCCCTCGTGGCCATTTTCGGCTACTGGCTGGTTCCCGGTGGTCTCGCTTGGGCTCTGTCCAAGTTCAGACAGGGAAAACCTCTCACCAACAAACCTGCCATTCCCGGACCTTCTGGTTTTCCGGTGGTGGGTCTTGTTTATGCTTTCACAGGGTCTCTCACTCACAGAGTCCTTGCTAAGCTTGCTCACACCTTCGATGCCAAGCCTCTGATGGCATTCTCGGTTGGGTTTACTCGTTTCATCATCTCATCTCACCCTGACACTGCCAAAGAGATTTTGAGCAGTTCAGCTTTCGCCGACCGTCCTATCAAGGAGTCTGCTTATGAGCTCCTCTTCCACCGTGCAATGGGGTTTGCCCCGTACGGTGAGTACTGGAGGAACCTGAGGAGGATTTCCGCCACTCACATGTTCTCTCCAAAGAGAATCGCCGCCTCCGGCGGGTTCCGGTCTGAGGTTGGGGCTCAGATGGTGAAAGACATCGTGGACCTGATGAGGAGAGATGGTGAGGTAGAGGTGAGGAAGGTGTTGCATTTCGCGTCCTTGAATAACGTGATGATGAGCGTGTTTGGGAAGAGTTATGTGTTTGGTGAGGGTGGTGATGGGTGTGAGCTTGAGGAGTTGGTGAGTGAGGGGTATGAATTGCTTGGGGTGTTTAACTGGAGTGATCACTTTCCACTTTTGGGTAGGTTGGATTTGCAAGGTGTGAGGAAGAGGTGTAGGAGTTTGGTGGAAAGGGTGAATGTTTTTGTCGGAAAAATCATTGCGGAGCACCGGGAGAAGAGGGCTGCTGCAGGCGAGGACAAGGCCAAGGAGGATAATGAGAGCTCCGGCGACTTTGTTGACGTGCTTCTGGATTTGGAGAAAGAGAACAGGCTCCAACACTCTGACATGGTTGCTGTTTTGTGGGAAATGATCTTTCGGGGGACTGATACAGTGGCAATACTCCTTGAATGGATTCTTGCGAGGATGGTTCTACACCCTGAAATCCAAGCAAAGGCTCAATCTGAAATAGACTCTGTTGTTGGGTGTGAGCGGAGTGTGAATGATGATGACCTTGCCAAGCTTCCTTACGTGAGGGCCATAGTGAAGGAAACTCTGAGGATGCACCCACCGGGTCCTCTTCTGTCATGGGCCAGGTTTTCCATCCACGACACAGAAATTGGAAACCACTTTGTTCCAGCTGGTACGACAGCCATGGTTAACATGTGGGCCATCACTCATGACGAAGAAGTGTGGTCTGAACCGGAAGAGTTCAAACCGGAGCGTTTTGTGAAGGAGGAGGTGCACATGATGGGTTCCGATCTGAGGTTGGCACCTTTCGGGTCTGGGAGAAGGGTGTGCCCTGGGAAAGCCATGGGTTTGGCTACGGTTGAGGTTTGGGTTGCGATGTTGCTGCAAAAGCTGAAATGGATGGGTGGTGATTGTGGCGTGGATCTGTCTGAACGCTTGGAACTGTCTATGAAAATGAAATGCTCTCTCATCACCAAAGTTGTTCGGAGGCATGCTCTTTTCGTGCCTTCTGTAACCCATTCTGCTTGA 1623 0.5089 MSSELCSLFLPLSACSAMLTFDVFIGVMSLVAIFGYWLVPGGLAWALSKFRQGKPLTNKPAIPGPSGFPVVGLVYAFTGSLTHRVLAKLAHTFDAKPLMAFSVGFTRFIISSHPDTAKEILSSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPKRIAASGGFRSEVGAQMVKDIVDLMRRDGEVEVRKVLHFASLNNVMMSVFGKSYVFGEGGDGCELEELVSEGYELLGVFNWSDHFPLLGRLDLQGVRKRCRSLVERVNVFVGKIIAEHREKRAAAGEDKAKEDNESSGDFVDVLLDLEKENRLQHSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQSEIDSVVGCERSVNDDDLAKLPYVRAIVKETLRMHPPGPLLSWARFSIHDTEIGNHFVPAGTTAMVNMWAITHDEEVWSEPEEFKPERFVKEEVHMMGSDLRLAPFGSGRRVCPGKAMGLATVEVWVAMLLQKLKWMGGDCGVDLSERLELSMKMKCSLITKVVRRHALFVPSVTHSA 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04682 540 CDD CYP78 95 521 - -
Viun3g04682 540 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 SUPERFAMILY Cytochrome P450 62 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Viun3g04682 540 Pfam Cytochrome P450 63 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 FunFam Cytochrome P450 78A5 54 528 - -
Viun3g04682 540 Gene3D Cytochrome P450 49 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g04682 540 PANTHER CYTOCHROME P450 78A7-RELATED 19 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04682 Viun-Chr3 54204941 54206814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04682 1 528 Cytochrome P450 AT1G74110 63.031 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04682 K20619 - gmx:100811042 852.432