Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04672 ATGGCAGCAAAGTTCTTGCATTCTTTAGCAGATGACAACCCAGATTTAAAAAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCATCACATTATTTCCTCTCCCCATATTACCCGGAAGAGGCTTCATCCAGGTAATTCCCTCTTCAATTATGCCAGTCTGGAAAGAGGTTCTAATATCATACACCAGCCGCAATCAACAGCTGATATGAGGGATATGAGTAATAAGCATAAAATTTCAGCTGAATCTTCAAGAACCTCATTCTCTTCTTGTTCATCATCAATGTCCTCTTTGGACTATAAAGCTGAAGCAGATGCTCCCTTTGAAAGGATTGGTTTTCCTGAAACTCCTATGAGAGACCCAGTTATGAACCAAGCAAGTACCTCTCCCCATTTAGGATGTTCATCCCTTGATCTGAGGGATGTGGTGAAGGAGTGTATATATAGGGAAGCCAGAGGACTGTGCAAAGAAAGGGATTACCCTAGACAATTTCAGCTGTCTAAATCTGTCGATAGAAAGCAAACTCCTATTGATCTAAAGGAGTCACTGCGAGTCCTTGCTATACTTAGAGAAACACCTCGGCATTATGTTGAAGCTAAAGAACTTCCTAGATTATCAAATGAAGTAAAAGATGGACATTGGCATTCCATTTCAAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAGCAACAAGTGAGATATCTTTTGACTCGAATGATACCTTGAAATGCCAACAAAAACTAAAAGAGCTTCCTAGACTTTCACTGGACAGTAGGGAAGGTTCATGGCGCGCAAACGGCTCTGATTCAAAACTCAGTAACCTCTCAAGAAATTTCAATGCAGGTGACTCCTCCACCTCAGTTGATGGCATTTCTAGTCTACAACAGCGTTCAGCATCACAGAGACGGCCACCTAGTATTGTAGCAAAGTTAATGGGCTTGGAAGCATTGCCAGAATCCTATGTGGTTAGTGATACCAAGTCAAGTTTGAGTGAAACTGACTCAACTCAAGGCAATGATCAGTTTGGGAAAAATGGATTCGTTACACCACTTCCGGTTGCTAATTTCCCTGAAGTCCCATTGAAAGAGAAAGAGATGACTTCTCCACGGTGGAAGAATCCTGATTTGGTTGTGAAACCAATATTGAATACAAGGTTTCCCATTGAACCTGCACCTTGGAAGCAGCAGGATGGGAACCAAATCTCTGAGAAACTAACATCCAGGGTCATAAAACCTACATCAAGAACACCAGATTCATTTCCTTCAGTTTATAGTGAGATTGAGAATAGATTAAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTCAAACAGATATTGGAAACAATGCAAGTAAAGGGTCTGTTAGAGACCAGAAAAGAAGAACAAGCTTCAAATGTTGTTCGAAATAAAAGAGACTATGAACTAAAATCGACCTCAATTAAGCATTCTACGAGGCAGGAAACAGCCTGGGAATCCGATTCTACAATGGCTGTAGAGTCACCAATAGTGATCATGAAACCAGCAAAAATTGTTGAAAAAACTGGACCTTTTGCTTCTTCAGTCTTTCCAATTCATGAACTTTCTGATTCCCACAAACTTCAGAGTGGTGGTGTACATGAACATGGTAAAAAGGGGATACCTTCCAGTCAAATAGCAAAAGATCAATCTCCTAGAAACAGTCCCAAGGATACTTCTACCAGTTTTAGTGAAAAGAAAGCAAATAGTATCAAGACTATAAAATCAACACAATCCCTACCAAGGTCTACACAATTTCCAAAAGAAAATGGCCCAAGCTCAGTAAAGAGTTCAAGATCTGCTAGCCCAAGAATGCAACAAAAGAAGTCAGCATCGGAGAAGCAATCTTGCCTTCTTACCCCATCATCAGATTCAAATAATCCCAGAAGGCAGTTCTGTAAGCAGACAACAGACTCAGATTCTCCCAGTCAAAAACTGAGACCTAAAGTCCCTAATTCACATAGCAGTAATGACAGACTCAGTGAGACTAGCAATGAACTAAGAAGTTTAAGTAGCCAGTGGGATGAAGTATCTCTGCAATCAGACAGTATCTCTTTCGACTCAAAGATGGATATTGAAGTTACCAGCAATTTACAATCTGCTGAAGTTGTTGATAGCCAATGCCCATCTAGGAAGGCTGCTGAGCATTTGGTTTCAGGATCCATGCATAAGAAATCAACTATGAGGTGGGATGAGGATAAGTCAATAGCAGAACTTACAACACACGCCTCAGGTCATCCAAGTCTTGGATCAGTTGTCGATGTCTCAGTATACAAATTCGGTATGCCATCCCCAGTAAAGGATATATCCTATTCTCGTAAAGTTGAAAACGCTCAAGAGTCTAAAGAAAATTATCATACAGATCAGTGGAGCCCTGCAGAAGGCCTCTTCATTAACAATACAAGATATAGAGAGATCAACCACAAGAAATTGCAAAGCATAGGTCACCTTATTCAAAAGCTTAGACAGCTAAACTCTAGTCATGATGAAACTAGAATCGATTACATAGCTTCCCTTTGTGAAAATACAAACTCAGACCACAGATACATTGCTGAAATACTATTGGCTTCAGGTCTACTTCTGAGAGCTTTGAGTTCTGAGTTGCTAACATTTCAACATCACTCTTCAGGTCATCCCATTAACCCCGAGTTATTCCTTGTGTTGGAACAAACCAAGTTAAGTAGTTTGCTTTCAAAACAAGGGGGCAGCGATGAAAAAGTTGCTTACGGGAAGCTAAATACAGAGAAGTGGCACAGGAAACTCATCTTTGATACTGTGAATGAGATTCTTGGTACTAAGCTAGGCTCTTCTCGAGAGCCATGGTTCAAGCCTAGTGGACTTACAAGGAAATTCGTCACTGCACAAAAGCTTCTTAAAGAACTATGCTTTGAGATACAAAAACTTAAATATGTGAAACCAGATTGCAAAGATGAAGGGGATGATATGAAAAGTATGCTAGGGGAAGATGTGATGCGTCACTCAGAAAACTGGACAAGTTTCCCCGGTGAATTACCAGGAGTTGTGTTGGATGTTGAGAGACAGATATTTAAGGACTTAATTGATGAGTTTGTGATTGATGAATGTTTGCGAGTGACGTACAGTAGGCACAGCAAGCTATTTGGAAAGTAG 3168 0.4044 MAAKFLHSLADDNPDLKKQIGCMTGIFQLFDRHHIISSPHITRKRLHPGNSLFNYASLERGSNIIHQPQSTADMRDMSNKHKISAESSRTSFSSCSSSMSSLDYKAEADAPFERIGFPETPMRDPVMNQASTSPHLGCSSLDLRDVVKECIYREARGLCKERDYPRQFQLSKSVDRKQTPIDLKESLRVLAILRETPRHYVEAKELPRLSNEVKDGHWHSISKDAPRFSYDGRATSEISFDSNDTLKCQQKLKELPRLSLDSREGSWRANGSDSKLSNLSRNFNAGDSSTSVDGISSLQQRSASQRRPPSIVAKLMGLEALPESYVVSDTKSSLSETDSTQGNDQFGKNGFVTPLPVANFPEVPLKEKEMTSPRWKNPDLVVKPILNTRFPIEPAPWKQQDGNQISEKLTSRVIKPTSRTPDSFPSVYSEIENRLKDLEFKQSGRDLRALKQILETMQVKGLLETRKEEQASNVVRNKRDYELKSTSIKHSTRQETAWESDSTMAVESPIVIMKPAKIVEKTGPFASSVFPIHELSDSHKLQSGGVHEHGKKGIPSSQIAKDQSPRNSPKDTSTSFSEKKANSIKTIKSTQSLPRSTQFPKENGPSSVKSSRSASPRMQQKKSASEKQSCLLTPSSDSNNPRRQFCKQTTDSDSPSQKLRPKVPNSHSSNDRLSETSNELRSLSSQWDEVSLQSDSISFDSKMDIEVTSNLQSAEVVDSQCPSRKAAEHLVSGSMHKKSTMRWDEDKSIAELTTHASGHPSLGSVVDVSVYKFGMPSPVKDISYSRKVENAQESKENYHTDQWSPAEGLFINNTRYREINHKKLQSIGHLIQKLRQLNSSHDETRIDYIASLCENTNSDHRYIAEILLASGLLLRALSSELLTFQHHSSGHPINPELFLVLEQTKLSSLLSKQGGSDEKVAYGKLNTEKWHRKLIFDTVNEILGTKLGSSREPWFKPSGLTRKFVTAQKLLKELCFEIQKLKYVKPDCKDEGDDMKSMLGEDVMRHSENWTSFPGELPGVVLDVERQIFKDLIDEFVIDECLRVTYSRHSKLFGK 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04672 1055 MobiDBLite consensus disorder prediction 329 348 - -
Viun3g04672 1055 MobiDBLite consensus disorder prediction 540 687 - -
Viun3g04672 1055 MobiDBLite consensus disorder prediction 557 687 - -
Viun3g04672 1055 MobiDBLite consensus disorder prediction 329 350 - -
Viun3g04672 1055 Pfam DUF761-associated sequence motif 299 326 IPR032795 -
Viun3g04672 1055 MobiDBLite consensus disorder prediction 265 307 - -
Viun3g04672 1055 Pfam Domain of unknown function (DUF4378) 859 1035 IPR025486 -
Viun3g04672 1055 PANTHER LONGIFOLIA PROTEIN 1 1044 IPR033334 GO:0051513
Viun3g04672 1055 MobiDBLite consensus disorder prediction 263 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04672 Viun-Chr3 54134288 54139702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04672 127 1054 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 43.505 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04672 - - vum:124830690 1843.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04672 3 54134288 54139702 Viun3g04672 3 54134288 54139702 ECH
Viun3g04672 3 54134288 54139702 Viun9g00833 9 6224561 6230412 PCT