Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04610 ATGGGGGGGATTGTGGCTCAGCTACAGGATTACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCAGAGAAGGGGAGAGACGCGGCCAAATCTCAGACATACTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAGTATGAGGGTTGTCCTGTTCTGCCGTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTCTGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGCGGGGAGCAAAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAAAGAACTACTACACATTTTGTGTCCTTTGAATCCACAAGCTTCCCATTTAAGATATCTTCAGTATATTTCCAGGAGAAGTTTGGGCGCTGAATGGCCACCATCGGAAACACCCTTATTTTTGGATTGTCTGATTCTTAGAGTCCTTCCAATATTTGACGATGGAAAAGGTTGCAGGCCCGTTGTACGTGTTTATGGTCAAGACCCTTCAATTTCTGCCACTAGAAGTTCAAAGCTTCTTTTTTCAACTTCACAATCCAAAAAACATGTTCGCCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACTTGCGTTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGATTTTGTTCGTGAGGAATTGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGATTGAGAGTGCTGAGACAGAAAGTGCTTCACCTGATGAGTTCTATGAAGTAGAAGAGATCTTCAGCAGTGTAATTGATGCACAAGAAGGTAAGACAGAGTATTATTCTCAGGCTTTCCATGAAAATGCTGTGAATGATGAAACTCATAAAGAGGTCTGGAGGCATAAGTCTGATCCTAATAATTTTGAGGATTGTCCACCAGATGACAAGATCACCAAGCAGGTTTACAAGATGGATCCTGGTATCAATACTGTGAAAGACATCTCTATTGATGATGCTCACTATAACTATAAATTTGATGGGAGCGTAGATTCAGACCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGTCACCTTCCACTGCAGTTGTTTCTGATATGATGAAACCTCCTCTGGAAACAAAGGAAGTTACCATGCATGTGCAACAGGAATTTGCAGTCACTGAAAATGAATATGATGAAGATAAGGAGGTAACAGAGAAGGAGCCAGACTCCAAGGCTGGGAACCAGATGCCTGATTTGGCTGAACAAAAATATGGGAAAGTACTTCCATCTACTGCCAAGAAACAACCTCCATCCAACTCGAAGCCAGTTGGAGATACAGTTGCAGCAAAGCAAAAGACTAAACAGCAAGAAACCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACTAGATGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCACGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGATAAATTTGTCTTCCACAAAAGAGAAAATGGAAGATGCCAAAACAAGATCCTTATCTGCTCCTGTTGTTTCTGCAGTTGTTGCTTCTATTGACAAAACAAATGACCTAAAAAGCCGGAAGGTGGCCTCTTCAAAATCTTCTGGCTATATAGCAGCAGAAATAGATGAAAAAGGTCTACCATCACCATTGTCATCAATTAAAGAGACATCTTTTCAGTCAGATACTCCAGCGCAAGAGCAGAGCTCAGAACAACTGCTACATCCTTCCTCACCTCCTCCCCTTCCCCCTCCAGCTCACAGTAGAGTCTCTTCTCAAGTTTTTGAATCCTCATCATTAAAGGACGGTGTATCAGCTCAAGGCTCTCCATCTCCTGTAGTATCACCATCTTCTTTGGGTGGGAAAGGGCCCCTCATGCCACCACCACCACCACCTCCTCCACCACCACCATTTCAACCTTCAACTTTAACAACATTTATGAGACCACCTGAAACTTCTCTTCCTTTCTCTCCACCCCCACCACCACCCCCGCCCCCCTTTTTTGGGGAAAATGTAGGGAGCTTAGTACCTTTCCCATCCCCTAGGAAATCTGTGGCTTCATCAATAGTTGAAGAGACTAGTGTATCTTTAACACTTCCTACAACCCCTCTTCCATTTGCAAGCATCGATGTTACACTGGATGTTTCTCAAGTGGTTACTGCAGTGATCCCTTCACAGCCTCCTCCACCGCCACCACCTCCAAGGTATGAAGTTTCATCCATTCCTCCTTTGACACCATTAGCATCACCTCTTCCAAAGAATGAAATTCCGTCGGTTCCCCCTCCTCCCATGTTTCCTACAGCTTCAACAAATAGGGCTCCACCTCCTCCACCTCCTCCACCCCCTCCTCCCCCAACACCCCCATTTGCATCATATAAAGGTTCACCTCCACCAGCAACCCCACCTCCAACTCAACCCCTTTCTCCGCCTCCCCCTCCCCCTCCCCCTCCCCTAGCCAATTCACATATATATTCAGCTACACCACCTATACCTCCCCCTCCACCACCTTTAGCTAATTCACACATATATTCAACTTCACCACCTATACCTCCGCCACCACCTCCTCCTCCTTTTGGTACAACTTCATTACCTCCCTCTCCACCTCCTTTCAATAGTCCTCCTCCACCACCACCACCACCTCCTTTTAGTCAAGCTCCACCACCACCACCTCCACCCACACCTCCTCCTCTATCAAGTGTGGCCCCGCCTCCACCTCCTCCAATGTATAAAGCCGCACCTCCCCCGCCACCACCTCTTCCTCCATCAAATGGAGCCCCACCTCCTCCACCACCACCTCTTCCTCCATCAAATGGAGCCCCACCTCCACCGCCACCTCCACCACCTCTTCCTCCATCAAGTGGAGCCCCACCACCCCCTCCACCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCACCGATGTATGGCACACCACCTCCACCACCTCCTCCTCCAGGCGGTCAAGGACCACCTCCCCCACCTCCTCCTCCAGGCGGTCAAGGACCACCTCCCCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCACCTCCTCCCATGTATGGAACACCCGCTCCTCCACCCCCTCCATCGTATGGAGCACCACCACCTCCTGGTGGTCGAGGACCACCTCCTCCTCCTCCCCCAATGTTTGGAGCACCACCTCCACCTCCTGGTGGTAGAGGACCACCTCCTCCTCCCCCCCCAATGTTTGGAGCACCACCTCCACCTCCTGGTGGTAGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGAGGTCCTCCACCTCCCCCAGGTGTTCCTGGTGCTCCTGCACCTCCTGGGGGTGGACCTCCGCCACCTCCGCCATTTGGTGCAAAAGGTGCAAATGCTAGAGTTGATCCAAGAGGGGGAGGACGTGGGATTGGGCGCCCTACAGGGCCTGCAGCCCGTAAATCCTCTTTAAAGCCTTTACATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCACAAATTGCACCAGAGTTCGATTTTTCAGAGCTAGAGAAGCTTTTCTCCTTAAATGTTCCAAAACCTGCTGATGCTGGAAAATCTGGAGGGAAGGGCAAATCTGCTGGATCTAAAACTGACAGAGTCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCCGATATGATGGCTGCAGTACTGGCTTTGGACGAGTCAGTATTAGATGTTGATCAAGTGGAAAATCTTATTAAGTTTTGTCCTACAAAAGAGGAGATGGATCTTATAAAGGGATACACCGGTGACAAGGAACTTTTGGGGAAGTGTGAACAGTTTTTTATAGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTGCCTTCAAGATTCAGTTTGGCGCCCAGCTTACGGAATTTAAGAAGAGTTTAAACACTGTTAACTCTGCCTGTGAAGAGGTCCGACATTCTGCTAAACTGAAGGAGATAATGAAGAAAATACTCTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTAGATAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTCTGCAAGGTCCTAGCTGAAAAGTCACCCAAACTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGATTCCACTAAGAATCCCTTTTATTTACTCCGCATCTCTTGGTTTCATTTCTTAATGTGTACAAGGCTTACAAGCTGCTATTTGCTTGATGCAGCAAAAATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCGTCAAGGGATTAGAAAAAGTTAAACAAGAATTTGCTGCATGTGCAAATGATGGACCTGTTTCTGCAGTTTTCCATGAGAAATTGAAAGAATTTATTGGTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATGCTATAGTGGGTAGAAATGCTGATGCACTTGCCCTATATTTTGGTGAGGATCCTGCTCGTTGCCCTTTTGAGCAAGTTACCACAACCCTGCTAAATTTTATAAGGTTGTTCCGGAAAGCACATGAAGAAAATGGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAAAAGGCTAAGGGCGTTAACTTGACAAAAAAGGGTGCAAAAGATAGTTGA 5043 0.4648 MGGIVAQLQDYFPDASFMVFNFREGERRGQISDILSQYDMTVMEYPRQYEGCPVLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHILCPLNPQASHLRYLQYISRRSLGAEWPPSETPLFLDCLILRVLPIFDDGKGCRPVVRVYGQDPSISATRSSKLLFSTSQSKKHVRHYLQAECMLVKIDLRCRVQGDVVLECIHLSDDFVREELMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVSEDANEIESAETESASPDEFYEVEEIFSSVIDAQEGKTEYYSQAFHENAVNDETHKEVWRHKSDPNNFEDCPPDDKITKQVYKMDPGINTVKDISIDDAHYNYKFDGSVDSDPHAVKDIAVDDGEIKSPSTAVVSDMMKPPLETKEVTMHVQQEFAVTENEYDEDKEVTEKEPDSKAGNQMPDLAEQKYGKVLPSTAKKQPPSNSKPVGDTVAAKQKTKQQETHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALINLSSTKEKMEDAKTRSLSAPVVSAVVASIDKTNDLKSRKVASSKSSGYIAAEIDEKGLPSPLSSIKETSFQSDTPAQEQSSEQLLHPSSPPPLPPPAHSRVSSQVFESSSLKDGVSAQGSPSPVVSPSSLGGKGPLMPPPPPPPPPPPFQPSTLTTFMRPPETSLPFSPPPPPPPPPFFGENVGSLVPFPSPRKSVASSIVEETSVSLTLPTTPLPFASIDVTLDVSQVVTAVIPSQPPPPPPPPRYEVSSIPPLTPLASPLPKNEIPSVPPPPMFPTASTNRAPPPPPPPPPPPPTPPFASYKGSPPPATPPPTQPLSPPPPPPPPPLANSHIYSATPPIPPPPPPLANSHIYSTSPPIPPPPPPPPFGTTSLPPSPPPFNSPPPPPPPPPFSQAPPPPPPPTPPPLSSVAPPPPPPMYKAAPPPPPPLPPSNGAPPPPPPPLPPSNGAPPPPPPPPPLPPSSGAPPPPPPPMYGAPPPPPPPPMYGTPPPPPPPPGGQGPPPPPPPPGGQGPPPPPPPMYGAPPPPPPPMYGAPPPPPPPMYGTPAPPPPPSYGAPPPPGGRGPPPPPPPMFGAPPPPPGGRGPPPPPPPMFGAPPPPPGGRGPPPPPPPGGRGPPPPPGVPGAPAPPGGGPPPPPPFGAKGANARVDPRGGGRGIGRPTGPAARKSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDFSELEKLFSLNVPKPADAGKSGGKGKSAGSKTDRVTLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLIKGYTGDKELLGKCEQFFIELMKVPRVESKLRVFAFKIQFGAQLTEFKKSLNTVNSACEEVRHSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPKLLDFHLDLVSLEDSTKNPFYLLRISWFHFLMCTRLTSCYLLDAAKIQLKSLAEEMQAIVKGLEKVKQEFAACANDGPVSAVFHEKLKEFIGVSESEVASLTNLYAIVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENGKQAELEKKKAEKEAEMEKAKGVNLTKKGAKDS 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04610 1680 MobiDBLite consensus disorder prediction 810 1218 - -
Viun3g04610 1680 Gene3D Formin, FH2 domain 1236 1652 IPR042201 -
Viun3g04610 1680 Pfam C2 domain of PTEN tumour-suppressor protein 156 293 IPR014020 -
Viun3g04610 1680 SMART PTEN_C2_2 155 295 IPR014020 -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 638 662 - -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 466 551 - -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 1293 1312 - -
Viun3g04610 1680 SMART it6_source 583 1668 IPR015425 -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 773 790 - -
Viun3g04610 1680 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 157 293 IPR035892 -
Viun3g04610 1680 Gene3D - 162 293 - -
Viun3g04610 1680 PANTHER FORMIN-J 1153 1672 - -
Viun3g04610 1680 Gene3D Protein tyrosine phosphatase superfamily 1 161 IPR029021 -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 677 703 - -
Viun3g04610 1680 Coils Coil 1641 1675 - -
Viun3g04610 1680 Pfam Formin Homology 2 Domain 1243 1515 IPR015425 -
Viun3g04610 1680 Pfam Formin Homology 2 Domain 1541 1640 IPR015425 -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 709 730 - -
Viun3g04610 1680 Coils Coil 1547 1567 - -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 1647 1680 - -
Viun3g04610 1680 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1237 1666 IPR015425 -
Viun3g04610 1680 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1183 1660 - -
Viun3g04610 1680 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 144 IPR029021 -
Viun3g04610 1680 ProSiteProfiles C2 tensin-type domain profile. 157 296 IPR014020 -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 505 551 - -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 809 1249 - -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 606 790 - -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 739 757 - -
Viun3g04610 1680 MobiDBLite consensus disorder prediction 466 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04610 Viun-Chr3 53617774 53635758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04610 1 599 FH2 protein (formin) Gene Family AT5G07740 58.621 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04610 - - vun:114178199 1619.75