Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04609 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCCCGGATGTCTTGGAAGAAGATGAATATAGAGTTTATATGGGGGGGATTGTGGCTCAGCTACAGGATTACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCAGAGAAGGGGAGAGACGCGGCCAAATCTCAGACATACTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAGTATGAGGGTTGTCCTGTTCTGCCGTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTCTGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGCGGGGAGCAAAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAAAGAACTACTACACATTTTGTGTCCTTTGAATCCACAAGCTTCCCATTTAAGATATCTTCAGTATATTTCCAGGAGAAGTTTGGGCGCTGAATGGCCACCATCGGAAACACCCTTATTTTTGGATTGTCTGATTCTTAGAGTCCTTCCAATATTTGACGATGGAAAAGGTTGCAGGCCCGTTGTACGTGTTTATGGTCAAGACCCTTCAATTTCTGCCACTAGAAGTTCAAAGCTTCTTTTTTCAACTTCACAATCCAAAAAACATGTTCGCCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACTTGCGTTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGATTTTGTTCGTGAGGAATTGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGATTGAGAGTGCTGAGACAGAAAGTGCTTCACCTGATGAGTTCTATGAAGTAGAAGAGATCTTCAGCAGTGTAATTGATGCACAAGAAGGTAAGACAGAGTATTATTCTCAGGCTTTCCATGAAAATGCTGTGAATGATGAAACTCATAAAGAGGTCTGGAGGCATAAGTCTGATCCTAATAATTTTGAGGATTGTCCACCAGATGACAAGATCACCAAGCAGGTTTACAAGATGGATCCTGGTATCAATACTGTGAAAGACATCTCTATTGATGATGCTCACTATAACTATAAATTTGATGGGAGCGTAGATTCAGACCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGTCACCTTCCACTGCAGTTGTTTCTGATATGATGAAACCTCCTCTGGAAACAAAGGAAGTTACCATGCATGTGCAACAGGAATTTGCAGTCACTGAAAATGAATATGATGAAGATAAGGAGGTAACAGAGAAGGAGCCAGACTCCAAGGCTGGGAACCAGATGCCTGATTTGGCTGAACAAAAATATGGGAAAGTACTTCCATCTACTGCCAAGAAACAACCTCCATCCAACTCGAAGCCAGTTGGAGATACAGTTGCAGCAAAGCAAAAGACTAAACAGCAAGAAACCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACTAGATGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCACGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGATAAATTTGTCTTCCACAAAAGAGAAAATGGAAGATGCCAAAACAAGATCCTTATCTGCTCCTGTTGTTTCTGCAGTTGTTGCTTCTATTGACAAAACAAATGACCTAAAAAGCCGGAAGGTGGCCTCTTCAAAATCTTCTGGCTATATAGCAGCAGAAATAGATGAAAAAGGTCTACCATCACCATTGTCATCAATTAAAGAGACATCTTTTCAGTCAGATACTCCAGCGCAAGAGCAGAGCTCAGAACAACTGCTACATCCTTCCTCACCTCCTCCCCTTCCCCCTCCAGCTCACAGTAGAGTCTCTTCTCAAGTTTTTGAATCCTCATCATTAAAGGACGGTGTATCAGCTCAAGGCTCTCCATCTCCTGTAGTATCACCATCTTCTTTGGGTGGGAAAGGGCCCCTCATGCCACCACCACCACCACCTCCTCCACCACCACCATTTCAACCTTCAACTTTAACAACATTTATGAGACCACCTGAAACTTCTCTTCCTTTCTCTCCACCCCCACCACCACCCCCGCCCCCCTTTTTTGGGGAAAATGTAGGGAGCTTAGTACCTTTCCCATCCCCTAGGAAATCTGTGGCTTCATCAATAGTTGAAGAGACTAGTGTATCTTTAACACTTCCTACAACCCCTCTTCCATTTGCAAGCATCGATGTTACACTGGATGTTTCTCAAGTGGTTACTGCAGTGATCCCTTCACAGCCTCCTCCACCGCCACCACCTCCAAGGTATGAAGTTTCATCCATTCCTCCTTTGACACCATTAGCATCACCTCTTCCAAAGAATGAAATTCCGTCGGTTCCCCCTCCTCCCATGTTTCCTACAGCTTCAACAAATAGGGCTCCACCTCCTCCACCTCCTCCACCCCCTCCTCCCCCAACACCCCCATTTGCATCATATAAAGGTTCACCTCCACCAGCAACCCCACCTCCAACTCAACCCCTTTCTCCGCCTCCCCCTCCCCCTCCCCCTCCCCTAGCCAATTCACATATATATTCAGCTACACCACCTATACCTCCCCCTCCACCACCTTTAGCTAATTCACACATATATTCAACTTCACCACCTATACCTCCGCCACCACCTCCTCCTCCTTTTGGTACAACTTCATTACCTCCCTCTCCACCTCCTTTCAATAGTCCTCCTCCACCACCACCACCACCTCCTTTTAGTCAAGCTCCACCACCACCACCTCCACCCACACCTCCTCCTCTATCAAGTGTGGCCCCGCCTCCACCTCCTCCAATGTATAAAGCCGCACCTCCCCCGCCACCACCTCTTCCTCCATCAAATGGAGCCCCACCTCCTCCACCACCACCTCTTCCTCCATCAAATGGAGCCCCACCTCCACCGCCACCTCCACCACCTCTTCCTCCATCAAGTGGAGCCCCACCACCCCCTCCACCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCACCGATGTATGGCACACCACCTCCACCACCTCCTCCTCCAGGCGGTCAAGGACCACCTCCCCCACCTCCTCCTCCAGGCGGTCAAGGACCACCTCCCCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCACCTCCTCCCATGTATGGAACACCCGCTCCTCCACCCCCTCCATCGTATGGAGCACCACCACCTCCTGGTGGTCGAGGACCACCTCCTCCTCCTCCCCCAATGTTTGGAGCACCACCTCCACCTCCTGGTGGTAGAGGACCACCTCCTCCTCCCCCCCCAATGTTTGGAGCACCACCTCCACCTCCTGGTGGTAGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGAGGTCCTCCACCTCCCCCAGGTGTTCCTGGTGCTCCTGCACCTCCTGGGGGTGGACCTCCGCCACCTCCGCCATTTGGTGCAAAAGGTGCAAATGCTAGAGTTGATCCAAGAGGGGGAGGACGTGGGATTGGGCGCCCTACAGGGCCTGCAGCCCGTAAATCCTCTTTAAAGCCTTTACATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCACAAATTGCACCAGAGTTCGATTTTTCAGAGCTAGAGAAGCTTTTCTCCTTAAATGTTCCAAAACCTGCTGATGCTGGAAAATCTGGAGGGAAGGGCAAATCTGCTGGATCTAAAACTGACAGAGTCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCCGATATGATGGCTGCAGTACTGGCTTTGGACGAGTCAGTATTAGATGTTGATCAAGTGGAAAATCTTATTAAGTTTTGTCCTACAAAAGAGGAGATGGATCTTATAAAGGGATACACCGGTGACAAGGAACTTTTGGGGAAGTGTGAACAGTTTTTTATAGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTGCCTTCAAGATTCAGTTTGGCGCCCAGCTTACGGAATTTAAGAAGAGTTTAAACACTGTTAACTCTGCCTGTGAAGAGGTCCGACATTCTGCTAAACTGAAGGAGATAATGAAGAAAATACTCTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTAGATAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTCTGCAAGGTCCTAGCTGAAAAGTCACCCAAACTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGATTCCACTAAGAATCCCTTTTATTTACTCCGCATCTCTTGGTTTCATTTCTTAATGTGTACAAGGCTTACAAGCTGCTATTTGCTTGATGCAGCAAAAATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCGTCAAGGGATTAGAAAAAGTTAAACAAGAATTTGCTGCATGTGCAAATGATGGACCTGTTTCTGCAGTTTTCCATGAGAAATTGAAAGAATTTATTGGTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATGCTATAGTGGGTAGAAATGCTGATGCACTTGCCCTATATTTTGGTGAGGATCCTGCTCGTTGCCCTTTTGAGCAAGTTACCACAACCCTGCTAAATTTTATAAGGTTGTTCCGGAAAGCACATGAAGAAAATGGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAAAAGGCTAAGGGCGTTAACTTGACAAAAAAGGGTGCAAAAGATAGTTGA 5172 0.4646 MALFRRFFYRKPPDRLLEISERVYVFDCCFSPDVLEEDEYRVYMGGIVAQLQDYFPDASFMVFNFREGERRGQISDILSQYDMTVMEYPRQYEGCPVLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHILCPLNPQASHLRYLQYISRRSLGAEWPPSETPLFLDCLILRVLPIFDDGKGCRPVVRVYGQDPSISATRSSKLLFSTSQSKKHVRHYLQAECMLVKIDLRCRVQGDVVLECIHLSDDFVREELMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVSEDANEIESAETESASPDEFYEVEEIFSSVIDAQEGKTEYYSQAFHENAVNDETHKEVWRHKSDPNNFEDCPPDDKITKQVYKMDPGINTVKDISIDDAHYNYKFDGSVDSDPHAVKDIAVDDGEIKSPSTAVVSDMMKPPLETKEVTMHVQQEFAVTENEYDEDKEVTEKEPDSKAGNQMPDLAEQKYGKVLPSTAKKQPPSNSKPVGDTVAAKQKTKQQETHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALINLSSTKEKMEDAKTRSLSAPVVSAVVASIDKTNDLKSRKVASSKSSGYIAAEIDEKGLPSPLSSIKETSFQSDTPAQEQSSEQLLHPSSPPPLPPPAHSRVSSQVFESSSLKDGVSAQGSPSPVVSPSSLGGKGPLMPPPPPPPPPPPFQPSTLTTFMRPPETSLPFSPPPPPPPPPFFGENVGSLVPFPSPRKSVASSIVEETSVSLTLPTTPLPFASIDVTLDVSQVVTAVIPSQPPPPPPPPRYEVSSIPPLTPLASPLPKNEIPSVPPPPMFPTASTNRAPPPPPPPPPPPPTPPFASYKGSPPPATPPPTQPLSPPPPPPPPPLANSHIYSATPPIPPPPPPLANSHIYSTSPPIPPPPPPPPFGTTSLPPSPPPFNSPPPPPPPPPFSQAPPPPPPPTPPPLSSVAPPPPPPMYKAAPPPPPPLPPSNGAPPPPPPPLPPSNGAPPPPPPPPPLPPSSGAPPPPPPPMYGAPPPPPPPPMYGTPPPPPPPPGGQGPPPPPPPPGGQGPPPPPPPMYGAPPPPPPPMYGAPPPPPPPMYGTPAPPPPPSYGAPPPPGGRGPPPPPPPMFGAPPPPPGGRGPPPPPPPMFGAPPPPPGGRGPPPPPPPGGRGPPPPPGVPGAPAPPGGGPPPPPPFGAKGANARVDPRGGGRGIGRPTGPAARKSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDFSELEKLFSLNVPKPADAGKSGGKGKSAGSKTDRVTLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLIKGYTGDKELLGKCEQFFIELMKVPRVESKLRVFAFKIQFGAQLTEFKKSLNTVNSACEEVRHSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPKLLDFHLDLVSLEDSTKNPFYLLRISWFHFLMCTRLTSCYLLDAAKIQLKSLAEEMQAIVKGLEKVKQEFAACANDGPVSAVFHEKLKEFIGVSESEVASLTNLYAIVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENGKQAELEKKKAEKEAEMEKAKGVNLTKKGAKDS 1723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04609 1723 MobiDBLite consensus disorder prediction 649 833 - -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 548 594 - -
Viun3g04609 1723 PANTHER FORMIN-J 1196 1715 - -
Viun3g04609 1723 Gene3D Formin, FH2 domain 1279 1695 IPR042201 -
Viun3g04609 1723 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1280 1709 IPR015425 -
Viun3g04609 1723 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 816 833 - -
Viun3g04609 1723 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 752 773 - -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 681 705 - -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 720 746 - -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 509 594 - -
Viun3g04609 1723 Pfam Formin Homology 2 Domain 1584 1683 IPR015425 -
Viun3g04609 1723 Pfam Formin Homology 2 Domain 1286 1558 IPR015425 -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 1336 1355 - -
Viun3g04609 1723 SMART PTEN_C2_2 198 338 IPR014020 -
Viun3g04609 1723 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Viun3g04609 1723 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
Viun3g04609 1723 Gene3D - 205 336 - -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 782 800 - -
Viun3g04609 1723 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1226 1703 - -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 853 1261 - -
Viun3g04609 1723 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 509 528 - -
Viun3g04609 1723 Coils Coil 1590 1610 - -
Viun3g04609 1723 Coils Coil 1684 1718 - -
Viun3g04609 1723 SMART it6_source 626 1711 IPR015425 -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 1690 1723 - -
Viun3g04609 1723 MobiDBLite consensus disorder prediction 852 1292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04609 Viun-Chr3 53617774 53635804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04609 1 642 FH2 protein (formin) Gene Family AT5G07740 60.583 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04609 - - vun:114178199 1709.89