Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04607 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCCCGGATGTCTTGGAAGAAGATGAATATAGAGTTTATATGGGGGGGATTGTGGCTCAGCTACAGGATTACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCAGAGAAGGGGAGAGACGCGGCCAAATCTCAGACATACTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAGTATGAGGGTTGTCCTGTTCTGCCGTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTCTGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGCGGGGAGCAAAAGACTCTTGAAATGGTCTACAAGCAAGCTCCAAAAGAACTACTACACATTTTGTGTCCTTTGAATCCACAAGCTTCCCATTTAAGATATCTTCAGTATATTTCCAGGAGAAGTTTGGGCGCTGAATGGCCACCATCGGAAACACCCTTATTTTTGGATTGTCTGATTCTTAGAGTCCTTCCAATATTTGACGATGGAAAAGGTTGCAGGCCCGTTGTACGTGTTTATGGTCAAGACCCTTCAATTTCTGCCACTAGAAGTTCAAAGCTTCTTTTTTCAACTTCACAATCCAAAAAACATGTTCGCCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACTTGCGTTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAGTGATGATTTTGTTCGTGAGGAATTGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGATTGAGAGTGCTGAGACAGAAAGTGCTTCACCTGATGAGTTCTATGAAGTAGAAGAGATCTTCAGCAGTGTAATTGATGCACAAGAAGATGACAAGATCACCAAGCAGGTTTACAAGATGGATCCTGGTATCAATACTGTGAAAGACATCTCTATTGATGATGCTCACTATAACTATAAATTTGATGGGAGCGTAGATTCAGACCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGTCACCTTCCACTGCAGTTGTTTCTGATATGATGAAACCTCCTCTGGAAACAAAGGAAGTTACCATGCATGTGCAACAGGAATTTGCAGTCACTGAAAATGAATATGATGAAGATAAGGAGGTAACAGAGAAGGAGCCAGACTCCAAGGCTGGGAACCAGATGCCTGATTTGGCTGAACAAAAATATGGGAAAGTACTTCCATCTACTGCCAAGAAACAACCTCCATCCAACTCGAAGCCAGTTGGAGATACAGTTGCAGCAAAGCAAAAGACTAAACAGCAAGAAACCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACTAGATGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCACGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCACTGATAAATTTGTCTTCCACAAAAGAGAAAATGGAAGATGCCAAAACAAGATCCTTATCTGCTCCTGTTGTTTCTGCAGTTGTTGCTTCTATTGACAAAACAAATGACCTAAAAAGCCGGAAGGTGGCCTCTTCAAAATCTTCTGGCTATATAGCAGCAGAAATAGATGAAAAAGGTCTACCATCACCATTGTCATCAATTAAAGAGACATCTTTTCAGTCAGATACTCCAGCGCAAGAGCAGAGCTCAGAACAACTGCTACATCCTTCCTCACCTCCTCCCCTTCCCCCTCCAGCTCACAGTAGAGTCTCTTCTCAAGTTTTTGAATCCTCATCATTAAAGGACGGTGTATCAGCTCAAGGCTCTCCATCTCCTGTAGTATCACCATCTTCTTTGGGTGGGAAAGGGCCCCTCATGCCACCACCACCACCACCTCCTCCACCACCACCATTTCAACCTTCAACTTTAACAACATTTATGAGACCACCTGAAACTTCTCTTCCTTTCTCTCCACCCCCACCACCACCCCCGCCCCCCTTTTTTGGGGAAAATGTAGGGAGCTTAGTACCTTTCCCATCCCCTAGGAAATCTGTGGCTTCATCAATAGTTGAAGAGACTAGTGTATCTTTAACACTTCCTACAACCCCTCTTCCATTTGCAAGCATCGATGTTACACTGGATGTTTCTCAAGTGGTTACTGCAGTGATCCCTTCACAGCCTCCTCCACCGCCACCACCTCCAAGGTATGAAGTTTCATCCATTCCTCCTTTGACACCATTAGCATCACCTCTTCCAAAGAATGAAATTCCGTCGGTTCCCCCTCCTCCCATGTTTCCTACAGCTTCAACAAATAGGGCTCCACCTCCTCCACCTCCTCCACCCCCTCCTCCCCCAACACCCCCATTTGCATCATATAAAGGTTCACCTCCACCAGCAACCCCACCTCCAACTCAACCCCTTTCTCCGCCTCCCCCTCCCCCTCCCCCTCCCCTAGCCAATTCACATATATATTCAGCTACACCACCTATACCTCCCCCTCCACCACCTTTAGCTAATTCACACATATATTCAACTTCACCACCTATACCTCCGCCACCACCTCCTCCTCCTTTTGGTACAACTTCATTACCTCCCTCTCCACCTCCTTTCAATAGTCCTCCTCCACCACCACCACCACCTCCTTTTAGTCAAGCTCCACCACCACCACCTCCACCCACACCTCCTCCTCTATCAAGTGTGGCCCCGCCTCCACCTCCTCCAATGTATAAAGCCGCACCTCCCCCGCCACCACCTCTTCCTCCATCAAATGGAGCCCCACCTCCTCCACCACCACCTCTTCCTCCATCAAATGGAGCCCCACCTCCACCGCCACCTCCACCACCTCTTCCTCCATCAAGTGGAGCCCCACCACCCCCTCCACCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCACCGATGTATGGCACACCACCTCCACCACCTCCTCCTCCAGGCGGTCAAGGACCACCTCCCCCACCTCCTCCTCCAGGCGGTCAAGGACCACCTCCCCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCACCTCCTCCAATGTATGGAGCACCACCTCCTCCACCTCCTCCCATGTATGGAACACCCGCTCCTCCACCCCCTCCATCGTATGGAGCACCACCACCTCCTGGTGGTCGAGGACCACCTCCTCCTCCTCCCCCAATGTTTGGAGCACCACCTCCACCTCCTGGTGGTAGAGGACCACCTCCTCCTCCCCCCCCAATGTTTGGAGCACCACCTCCACCTCCTGGTGGTAGAGGACCACCTCCTCCACCTCCTCCTGGTGGTCGAGGTCCTCCACCTCCCCCAGGTGTTCCTGGTGCTCCTGCACCTCCTGGGGGTGGACCTCCGCCACCTCCGCCATTTGGTGCAAAAGGTGCAAATGCTAGAGTTGATCCAAGAGGGGGAGGACGTGGGATTGGGCGCCCTACAGGGCCTGCAGCCCGTAAATCCTCTTTAAAGCCTTTACATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCACAAATTGCACCAGAGTTCGATTTTTCAGAGCTAGAGAAGCTTTTCTCCTTAAATGTTCCAAAACCTGCTGATGCTGGAAAATCTGGAGGGAAGGGCAAATCTGCTGGATCTAAAACTGACAGAGTCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCCGATATGATGGCTGCAGTACTGGCTTTGGACGAGTCAGTATTAGATGTTGATCAAGTGGAAAATCTTATTAAGTTTTGTCCTACAAAAGAGGAGATGGATCTTATAAAGGGATACACCGGTGACAAGGAACTTTTGGGGAAGTGTGAACAGTTTTTTATAGAGTTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTTGCCTTCAAGATTCAGTTTGGCGCCCAGCTTACGGAATTTAAGAAGAGTTTAAACACTGTTAACTCTGCCTGTGAAGAGGTCCGACATTCTGCTAAACTGAAGGAGATAATGAAGAAAATACTCTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTAGATAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTCTGCAAGGTCCTAGCTGAAAAGTCACCCAAACTCCTTGATTTCCACCTAGACCTTGTTAGCCTGGAAGATTCCACTAAGAATCCCTTTTATTTACTCCGCATCTCTTGGTTTCATTTCTTAATGTGTACAAGGCTTACAAGCTGCTATTTGCTTGATGCAGCAAAAATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCGTCAAGGGATTAGAAAAAGTTAAACAAGAATTTGCTGCATGTGCAAATGATGGACCTGTTTCTGCAGTTTTCCATGAGAAATTGAAAGAATTTATTGGTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATGCTATAGTGGGTAGAAATGCTGATGCACTTGCCCTATATTTTGGTGAGGATCCTGCTCGTTGCCCTTTTGAGCAAGTTACCACAACCCTGCTAAATTTTATAAGGTTGTTCCGGAAAGCACATGAAGAAAATGGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAAAAGGCTAAGGGCGTTAACTTGACAAAAAAGGGTGCAAAAGATAGTTGA 5058 0.4664 MALFRRFFYRKPPDRLLEISERVYVFDCCFSPDVLEEDEYRVYMGGIVAQLQDYFPDASFMVFNFREGERRGQISDILSQYDMTVMEYPRQYEGCPVLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHILCPLNPQASHLRYLQYISRRSLGAEWPPSETPLFLDCLILRVLPIFDDGKGCRPVVRVYGQDPSISATRSSKLLFSTSQSKKHVRHYLQAECMLVKIDLRCRVQGDVVLECIHLSDDFVREELMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVSEDANEIESAETESASPDEFYEVEEIFSSVIDAQEDDKITKQVYKMDPGINTVKDISIDDAHYNYKFDGSVDSDPHAVKDIAVDDGEIKSPSTAVVSDMMKPPLETKEVTMHVQQEFAVTENEYDEDKEVTEKEPDSKAGNQMPDLAEQKYGKVLPSTAKKQPPSNSKPVGDTVAAKQKTKQQETHGFQAKQAKPNAVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALINLSSTKEKMEDAKTRSLSAPVVSAVVASIDKTNDLKSRKVASSKSSGYIAAEIDEKGLPSPLSSIKETSFQSDTPAQEQSSEQLLHPSSPPPLPPPAHSRVSSQVFESSSLKDGVSAQGSPSPVVSPSSLGGKGPLMPPPPPPPPPPPFQPSTLTTFMRPPETSLPFSPPPPPPPPPFFGENVGSLVPFPSPRKSVASSIVEETSVSLTLPTTPLPFASIDVTLDVSQVVTAVIPSQPPPPPPPPRYEVSSIPPLTPLASPLPKNEIPSVPPPPMFPTASTNRAPPPPPPPPPPPPTPPFASYKGSPPPATPPPTQPLSPPPPPPPPPLANSHIYSATPPIPPPPPPLANSHIYSTSPPIPPPPPPPPFGTTSLPPSPPPFNSPPPPPPPPPFSQAPPPPPPPTPPPLSSVAPPPPPPMYKAAPPPPPPLPPSNGAPPPPPPPLPPSNGAPPPPPPPPPLPPSSGAPPPPPPPMYGAPPPPPPPPMYGTPPPPPPPPGGQGPPPPPPPPGGQGPPPPPPPMYGAPPPPPPPMYGAPPPPPPPMYGTPAPPPPPSYGAPPPPGGRGPPPPPPPMFGAPPPPPGGRGPPPPPPPMFGAPPPPPGGRGPPPPPPPGGRGPPPPPGVPGAPAPPGGGPPPPPPFGAKGANARVDPRGGGRGIGRPTGPAARKSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDFSELEKLFSLNVPKPADAGKSGGKGKSAGSKTDRVTLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLIKGYTGDKELLGKCEQFFIELMKVPRVESKLRVFAFKIQFGAQLTEFKKSLNTVNSACEEVRHSAKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPKLLDFHLDLVSLEDSTKNPFYLLRISWFHFLMCTRLTSCYLLDAAKIQLKSLAEEMQAIVKGLEKVKQEFAACANDGPVSAVFHEKLKEFIGVSESEVASLTNLYAIVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENGKQAELEKKKAEKEAEMEKAKGVNLTKKGAKDS 1685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04607 1685 MobiDBLite consensus disorder prediction 471 556 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 814 1254 - -
Viun3g04607 1685 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1242 1671 IPR015425 -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 744 762 - -
Viun3g04607 1685 Coils Coil 1552 1572 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 815 1223 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 1652 1685 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 643 667 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 1298 1317 - -
Viun3g04607 1685 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
Viun3g04607 1685 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Viun3g04607 1685 Pfam Formin Homology 2 Domain 1546 1645 IPR015425 -
Viun3g04607 1685 Pfam Formin Homology 2 Domain 1248 1520 IPR015425 -
Viun3g04607 1685 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Viun3g04607 1685 SMART PTEN_C2_2 198 338 IPR014020 -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 778 795 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 471 490 - -
Viun3g04607 1685 PANTHER FORMIN-J 1147 1677 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 714 735 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 682 708 - -
Viun3g04607 1685 Coils Coil 1646 1680 - -
Viun3g04607 1685 Gene3D Formin, FH2 domain 1241 1657 IPR042201 -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 510 556 - -
Viun3g04607 1685 MobiDBLite consensus disorder prediction 611 795 - -
Viun3g04607 1685 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Viun3g04607 1685 Gene3D - 205 336 - -
Viun3g04607 1685 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Viun3g04607 1685 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1188 1665 - -
Viun3g04607 1685 SMART it6_source 588 1673 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04607 Viun-Chr3 53617774 53635804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04607 1 604 FH2 protein (formin) Gene Family AT5G07740 57.627 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04607 - - vun:114178199 1605.11